Gene Rpic12D_1502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1502 
Symbol 
ID8019147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1585989 
End bp1586969 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content64% 
IMG OID644830280 
Productprotein of unknown function DUF534 
Protein accessionYP_002981461 
Protein GI241663101 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0497356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGT TCAAGCACGC CTTCCGCATT GCCGCGCTTG CCGCCATTCC GATGGCACTC 
CTGCAAGCTG CGCCGGCGCT GGCCCAAGCC ACCAAGTCGG TCGAAGTGCT GGCCATCGTC
GAGCACCCGG CGCTGGACGC CATCCGCGAC GGCGCCAAGG AACAACTCAA GGCCGAAGGC
TTTGACGCAG GCAAGAACCT GAAGTGGGAA TACCAGAGCG CACAAGGCAG CACGGCCACC
GCCGCGCAGA TCGCCCGCAA GTTCATCGGC GACAAGCCGG ACGCCATCAT CGCCATCGCC
ACGCCGTCGG CGCAGGCCGT TGTGGCTGCC ACCAAGTCGA TCCCCGTCGT GTATTCGGGC
GTGACGGATC CGGTGGCCGC ACAACTGGTC AAGAGCTGGG AGCCGACCGG CACCAACGTG
ACCGGCGTGT CCGACAAGCT GCCGCTGGAC AAGCAGATCG CCCTGATCAA ACGCGTGGTG
CCGAATGCCA AGCGCGTGGG CATGGTCTAC AACCCGGGCG AAGCCAACTC GGTCGTGGTC
GTCACCGATC TGAAGAAGCT GCTGTCGGCG CAAGGCATGA CGCTGGTCGA ATCGGCTGCA
CCGCGCACGG TGGATATCGC GCCGGCAGCC AAGAACCTGA TCGGCAAGGT CGACGTGATC
TACACGAACA CCGACAACAA CGTGGTGTCG GCGTACGAAT CGCTGGTGAA GGTGGCCAAC
GAAGCGAAGA TCCCGCTGGT GGCCGGCGAT ACCGACAGCG TCAAGCGTGG CGCCATCGCA
GCGCTCGGCA TCAACTACTA CAAGCTGGGC CAGCAGACCG GCAAGGTCGT CGCCCGCATC
CTGAAGGGTG AGAAGCCAGG CGCGATTGCA TCGGCCGGCA GCACCGATTT GGAGCTGTTC
GTGAACGAAG GCGCGGCCAA GAAGCAAGGC GCGACCCTGT CGGCGGACCT GCTGAAGGAC
GCCAAGGAAG TCATCAAGTA A
 
Protein sequence
MSTFKHAFRI AALAAIPMAL LQAAPALAQA TKSVEVLAIV EHPALDAIRD GAKEQLKAEG 
FDAGKNLKWE YQSAQGSTAT AAQIARKFIG DKPDAIIAIA TPSAQAVVAA TKSIPVVYSG
VTDPVAAQLV KSWEPTGTNV TGVSDKLPLD KQIALIKRVV PNAKRVGMVY NPGEANSVVV
VTDLKKLLSA QGMTLVESAA PRTVDIAPAA KNLIGKVDVI YTNTDNNVVS AYESLVKVAN
EAKIPLVAGD TDSVKRGAIA ALGINYYKLG QQTGKVVARI LKGEKPGAIA SAGSTDLELF
VNEGAAKKQG ATLSADLLKD AKEVIK