Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1502 |
Symbol | |
ID | 8019147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1585989 |
End bp | 1586969 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830280 |
Product | protein of unknown function DUF534 |
Protein accession | YP_002981461 |
Protein GI | 241663101 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0497356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGT TCAAGCACGC CTTCCGCATT GCCGCGCTTG CCGCCATTCC GATGGCACTC CTGCAAGCTG CGCCGGCGCT GGCCCAAGCC ACCAAGTCGG TCGAAGTGCT GGCCATCGTC GAGCACCCGG CGCTGGACGC CATCCGCGAC GGCGCCAAGG AACAACTCAA GGCCGAAGGC TTTGACGCAG GCAAGAACCT GAAGTGGGAA TACCAGAGCG CACAAGGCAG CACGGCCACC GCCGCGCAGA TCGCCCGCAA GTTCATCGGC GACAAGCCGG ACGCCATCAT CGCCATCGCC ACGCCGTCGG CGCAGGCCGT TGTGGCTGCC ACCAAGTCGA TCCCCGTCGT GTATTCGGGC GTGACGGATC CGGTGGCCGC ACAACTGGTC AAGAGCTGGG AGCCGACCGG CACCAACGTG ACCGGCGTGT CCGACAAGCT GCCGCTGGAC AAGCAGATCG CCCTGATCAA ACGCGTGGTG CCGAATGCCA AGCGCGTGGG CATGGTCTAC AACCCGGGCG AAGCCAACTC GGTCGTGGTC GTCACCGATC TGAAGAAGCT GCTGTCGGCG CAAGGCATGA CGCTGGTCGA ATCGGCTGCA CCGCGCACGG TGGATATCGC GCCGGCAGCC AAGAACCTGA TCGGCAAGGT CGACGTGATC TACACGAACA CCGACAACAA CGTGGTGTCG GCGTACGAAT CGCTGGTGAA GGTGGCCAAC GAAGCGAAGA TCCCGCTGGT GGCCGGCGAT ACCGACAGCG TCAAGCGTGG CGCCATCGCA GCGCTCGGCA TCAACTACTA CAAGCTGGGC CAGCAGACCG GCAAGGTCGT CGCCCGCATC CTGAAGGGTG AGAAGCCAGG CGCGATTGCA TCGGCCGGCA GCACCGATTT GGAGCTGTTC GTGAACGAAG GCGCGGCCAA GAAGCAAGGC GCGACCCTGT CGGCGGACCT GCTGAAGGAC GCCAAGGAAG TCATCAAGTA A
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Protein sequence | MSTFKHAFRI AALAAIPMAL LQAAPALAQA TKSVEVLAIV EHPALDAIRD GAKEQLKAEG FDAGKNLKWE YQSAQGSTAT AAQIARKFIG DKPDAIIAIA TPSAQAVVAA TKSIPVVYSG VTDPVAAQLV KSWEPTGTNV TGVSDKLPLD KQIALIKRVV PNAKRVGMVY NPGEANSVVV VTDLKKLLSA QGMTLVESAA PRTVDIAPAA KNLIGKVDVI YTNTDNNVVS AYESLVKVAN EAKIPLVAGD TDSVKRGAIA ALGINYYKLG QQTGKVVARI LKGEKPGAIA SAGSTDLELF VNEGAAKKQG ATLSADLLKD AKEVIK
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