| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1496 |
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| Symbol | |
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| ID | 8019141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1579888 |
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| End bp | 1581516 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830274 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_002981455 |
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| Protein GI | 241663095 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.810818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA TGGGACAAAT GATGAGCACT CCGTTGCTCA TCTCGACCAT CATCGAACAT
GCAGCGCGCA ATTCCGGTTC GACTGAAGTC GTGTCGCGCC GTGTCGAGGG CGATATCCAT
CGCACCACGT ACCGGCAAGT GCGAGACCGC TCCAAGCAAC TGGCAAATGC GCTGGCCGCA
CTCGGTGTGC AGCCCGGCGA GCGTGTGGGT ACGCTGGCCT GGAACGGCTA TCGCCACCTT
GAAATCTATT ACGGCGTCTC CGGTTCGGGC TCGGTGTGCC ACACCATCAA CCCGCGGCTG
TTTCCTGACC AGATCGCCTA CATCGTCAAT CACGCAGACG ATCAATACGT TTTCTTCGAC
CTGACGTTCG TGCCGCTCGT CGAGGGCATC GCGCCGCATT GCCCGAACGT GAAGGGCTGG
GTGGCAATGA CCGATCGCGC GCACATGCCC ACCTCCAGCG TGCCGATGCT CTGCTACGAA
GAGCTGCTTG ATGCGCAGAG CGCCGACTAC ACCTGGCCGC AATTCGACGA GAACACCGCT
TCCAGCCTGT GCTACACGTC TGGTACCACG GGCAACCCCA AGGGCGCGCT GTATTCGCAT
CGATCCACGG TGCTGCACTC GTATGCGTCA GCCATGCCGG ATGCGCTTGG GTGCTCGGCG
CAGGACGTGA TCCTGCCGGT GGTGCCGATG TTCCACGTCA ACGCGTGGGG GCTGCCGTAT
TCGGTGCCGC TGGTGGGCGC CAAGCTGGTC TTCCCGGGGC CGAAACTGGA CGGTGCTTCG
CTGTTCGAAC TGTTCGAGCA GGAAAAGGTC ACGTTCTCGG CTGGCGTGCC GACCGTGTGG
CTCGGTCTGC TGCAACACGT GCAGGCCAAC AAGCTGAAAT TCTCGACGTT CCGCCGCACG
GTCATTGGTG GTTCCGCAGC GCCGCCGGCC ATGATCCGCA CACTCAACGA GCTGGACGTG
GAAGTCATCC ACGCGTGGGG CATGACCGAA ATGTCCCCGC TCGGCACCAC GTGCAAGCTG
ATGGGCAAGC ATGCCGACCT GCCGGACGAG GCCAAGCAGC ATGTGCTCGA ACGTCAGGGC
CGCGCCATCT ACGGCGTCGA GATGAAGATC GTCGATGCCG AAGGCCACGA ACTGCCATGG
GACGGCAAGG CTTTCGGCGA CCTCTACGTG CGCGGGCCCT GGACCATCCA GAGCTATTAC
CGCAACGAGG TATCGCCGCT GGTCGATGGC TGGTTCCCGA CGGGCGACGT CGCCAACATC
GATGCCGATG GCTACATGCA GATCACCGAT CGGAGCAAGG ACGTGATCAA GTCGGGCGGT
GAGTGGATTT CGTCCATCGA TGTGGAAAAC GTGGCCGCTG CGCACCCCGG CGTGCACATG
GCCGCTTGCA TCTCGTGCTA CCACCCGAAG TGGGACGAGC GCCCGTTGCT GGTGGTGATG
AAGAAGCCCG GTGTGGAACT CACGCGTGAG GAGATGCTCA AGTTCTTCGA AGGCAAGGTT
GCCAAATGGT GGATTCCGGA TGACGTGGTG TTTGTCACCG AAATTCCGCT CACGGCCACC
GGCAAGATGC AGAAGCTGAA GCTGCGCGAG CAGTTCAAGG ATTATCAGTT CCCCGCTGTA
CAGGCTTAG
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| Protein sequence | MALMGQMMST PLLISTIIEH AARNSGSTEV VSRRVEGDIH RTTYRQVRDR SKQLANALAA
LGVQPGERVG TLAWNGYRHL EIYYGVSGSG SVCHTINPRL FPDQIAYIVN HADDQYVFFD
LTFVPLVEGI APHCPNVKGW VAMTDRAHMP TSSVPMLCYE ELLDAQSADY TWPQFDENTA
SSLCYTSGTT GNPKGALYSH RSTVLHSYAS AMPDALGCSA QDVILPVVPM FHVNAWGLPY
SVPLVGAKLV FPGPKLDGAS LFELFEQEKV TFSAGVPTVW LGLLQHVQAN KLKFSTFRRT
VIGGSAAPPA MIRTLNELDV EVIHAWGMTE MSPLGTTCKL MGKHADLPDE AKQHVLERQG
RAIYGVEMKI VDAEGHELPW DGKAFGDLYV RGPWTIQSYY RNEVSPLVDG WFPTGDVANI
DADGYMQITD RSKDVIKSGG EWISSIDVEN VAAAHPGVHM AACISCYHPK WDERPLLVVM
KKPGVELTRE EMLKFFEGKV AKWWIPDDVV FVTEIPLTAT GKMQKLKLRE QFKDYQFPAV
QA
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