| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1488 |
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| Symbol | |
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| ID | 8019133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1568852 |
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| End bp | 1570933 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830266 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_002981447 |
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| Protein GI | 241663087 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00162023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0186497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGG AGTACAAGGT CCAGGACGGC GTTGCCGTCA TTACGCTCAG CAACCCGCCT
GTCAACGGCC TTGGCCACTC CACGCGCCTG GGCATCGTTG AGGGCATGGT GAAAGCGGGC
GACGACGCCA ACGTTAAGGC CATCGTCATC ACCGGTGCAG GCAAGGCCTT CTCGGGCGGC
GCCGATATCC GCGAATTCAA TACGCCCAAG GCGACGCAAG AGCCGACGCT GCATGCCGTG
ATCAAAGCCG TCGAGTCGAG CAGCAAGCCG GTCGTGGCGG CCATCCATTC GGTGGCGATG
GGCGGCGGGC TAGAACTGGC GATGGGCTGT CACTACCGCG TGGCCGCACC GGGCGCGCAG
ATCGCGCTGC CGGAAGTGAA GCTGGGCATC CTGCCGGGCG CTGGCGGCAC GCAACGTCTG
CCGCGCGCCA TCGGCCTGGA ACCGGCGCTG AACATGATTG TCTCCGGCAA TGCCATTCCG
TCGGAAAAGC TGGCCAAGAG CGGCCTGTTC GACCAGATGA TCGAAGGTGA CCTGATGGCC
GGTGCCATCG ATTTCGCACT GAAGGCCGCG GCCGAGGGCA AGCTGCCGAA GCTGCGCGAT
CGCAAGGTCG AGCACGACAA TCCGCAAGGT TTCCTGCAAT TCGCGCGCAA CACCGTCGCG
GCCGTCGCCA AGAACTTCCC GGCGCCGGGC AAGTGCGTTG ACGCCGTGCA GGCCGCCGTG
GAAAAGCGTT TTGACGACGG CATCAAGTTC GAGCGCGACC TGTTCATCGA ACTGGTGAAT
ACGCCGGAAT CGCGCGCACT GCGCCACGCC TTCTTTGGTG AACGCGCTGC GAGCAAGATT
CCGGACGTGC CGGAAGACAC GCCGGTGCGC AAGGTGGAGA AGGTTGCCGT GATCGGCGCC
GGCACGATGG GCGGCGGTAT CTCGATGAAC TTCCTGAACG CCGGCATTCC GGTGACGATC
CTGGAAACCA AGCAGGAAGC GCTGGACCGC GGCGTCGCCA CCATCCGCAA GAACTACGAG
AACAGCGCCA AGAAAGGCAA GCTCACGCAA GAGAAGGTCG AGCAGCGCAT GGCCCTGCTG
ACCCCGACGC TGTCTTACGA CGACATCAAG GATGCCGACC TCGTCATCGA GGCCGTCTTT
GAAGAAATGG GTGTCAAGGA AGTCGTGTTC AAGAAGCTGG ACGAAGTCGT CAAGCAGGGC
GCGATCCTGG CGTCGAACAC CTCCACGCTG GACGTCGACA AGATCGCCAG CTTCACCAAG
CGCCCGCAAG ACGTGGTCGG CATGCACTTC TTCAGCCCGG CCAACGTGAT GAAGCTGCTG
GAAGTCGTGC GCGGCAAGGA GACCGCCAAG GACGTGCTGG CCACCGTCAT GAAGCTGGCC
AAGGCCATCA AGAAGACGGC GGTCGTTTCC GGCGTGTGCG ATGGCTTCAT CGGCAACCGC
ATGATCGAGC AGTACAGCCG CCAGGCCGGC TACCTGCTGG ACGAAGGCGC GCTGCCCGAG
CAGGTCGACA AGGCCATCGA GAAGTTCGGC TTTGCCATGG GCCCGTTCCG CATGGGCGAT
CTGGCCGGCA ACGACATCGG CTGGGCCATC CGCAAGCGCC GCGCCGTGGA CAAGCCGGAC
ATCGTCTACT CGAAGACCGC CGATCTGCTG TGCGAGATGG GCCGCTTTGG TCAGAAGACC
GGCGGCGGCT GGTACGACTA CAAGGCGGGC GACCGCAAGC CGTATCCGAA CCAGCAGGTC
AACGACATGA TCGTCCAGCA CTCGAAGGAT CTGGGCATCA CGCGCCGCAA GATTTCGGAC
GAGGAAATCG TCGAGCGCCT GGTGTTCGCG CTGGTCAACG AAGGCGCGAA GATCCTGGAA
GAGGGCATTG CCTCCAAGGC TTCCGACATC GACATGGTGT ACCTGACCGG CTATGGCTTC
CCGCTGTTCC GCGGTGGCCC GATGCTCTAC GCAGACACGG TCGGCCTGTA CAACGTCGCG
CAAGCCATGC ACCGCTACAG CAAGGGCTAC CACGGTGAAG CGTGGAAGGT TGCCCCGCTG
CTGCAGAAGC TGGCCGATGA AGGCAAGGGC TTTAATGGCT GA
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| Protein sequence | MTAEYKVQDG VAVITLSNPP VNGLGHSTRL GIVEGMVKAG DDANVKAIVI TGAGKAFSGG
ADIREFNTPK ATQEPTLHAV IKAVESSSKP VVAAIHSVAM GGGLELAMGC HYRVAAPGAQ
IALPEVKLGI LPGAGGTQRL PRAIGLEPAL NMIVSGNAIP SEKLAKSGLF DQMIEGDLMA
GAIDFALKAA AEGKLPKLRD RKVEHDNPQG FLQFARNTVA AVAKNFPAPG KCVDAVQAAV
EKRFDDGIKF ERDLFIELVN TPESRALRHA FFGERAASKI PDVPEDTPVR KVEKVAVIGA
GTMGGGISMN FLNAGIPVTI LETKQEALDR GVATIRKNYE NSAKKGKLTQ EKVEQRMALL
TPTLSYDDIK DADLVIEAVF EEMGVKEVVF KKLDEVVKQG AILASNTSTL DVDKIASFTK
RPQDVVGMHF FSPANVMKLL EVVRGKETAK DVLATVMKLA KAIKKTAVVS GVCDGFIGNR
MIEQYSRQAG YLLDEGALPE QVDKAIEKFG FAMGPFRMGD LAGNDIGWAI RKRRAVDKPD
IVYSKTADLL CEMGRFGQKT GGGWYDYKAG DRKPYPNQQV NDMIVQHSKD LGITRRKISD
EEIVERLVFA LVNEGAKILE EGIASKASDI DMVYLTGYGF PLFRGGPMLY ADTVGLYNVA
QAMHRYSKGY HGEAWKVAPL LQKLADEGKG FNG
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