Gene Rpic12D_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1412 
Symbol 
ID8019057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1492120 
End bp1493151 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID644830191 
Productprotein of unknown function DUF182 
Protein accessionYP_002981372 
Protein GI241663012 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.070466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.227253 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCG TCGATCTTGA AGTCTTGAAA ACCAGCGTGC GCTGGTTGGA ACAGGGGCGG 
CGCGTGCTGC TCGTCACGGT GGTCAAAACG TGGGGTTCGT CGCCGCGGCC CGAGGGTGCG
ATGCTTGCAC TGCGCGATGA CGGCGTCGTC ATCGGCTCGG TCTCGGGCGG CTGCATTGAA
GACGACCTCA TCGACCGCGT GCGCCGCGAA GGCCTGCATT ACACCAAGCC CGAAGCCGTC
AAATACGGCA TCAGCGCTGA AGAAGCGCAT CGCTTTGGGC TGCCTTGCGG TGGCACGCTG
CAACTCGTGC TGGAGCCGCT AAACGCTTCC AGCGGAATCG ACGCCCTGCT GCGCGCCGTG
GAAGCCGGTC AGCTCGTCGC CCGCACGCTT GACATGGCGA CCGGCGCCGC AACGCTGCAG
CACGCCACCG TCACCGACGG CCTTCAGTTC GACGAAGCGC GCCTCGTGAC GATTCACGGG
CCGCGCTACC GGATGCTCGT CATTGGCGCG GGACAGCTTT CGCGCTACCT GTGCCAGATC
GCCGTGGGCC TGGATTACCA GATCACCGTC TGCGACCCGC GCGAGGAATA CAGCGAGGAG
TGGTCGATTC CCGGCGTGGC CATGGTCCGC ACCATGCCCG ACGACACGGT GATGGCCATG
AAGCTCGACG AGCGCTGCGC CGTCATCGCC CTCACCCACG ACCCCAAGCT CGATGACCTC
GCGCTCATGG AAGCGCTCAA GACGCCAGCG TTCTACGTGG GCGCACTCGG CAGCCGCCGC
AACAACGCCA ACCGGCGCGA GCGCCTCAAG GAATTCGATC TGAGCGATGC CGAGCTGGCG
CGCCTGCATG GGCCGGTCGG CATCTACATC GGCAGCCGCA CGCCGCCGGA AATCGCCATC
TCGATCCTGG CCGAAGTCAC GGCTGCCAAG AACGGCGTGT CGCTGCCGAC CATCCTGCAG
GTCGAAGGCG CCAAGGCGGC GCGCGAGATT GCCGCCAACG CCGCGTCAAG CTGCGCTGTG
CCGCAAAGCT GA
 
Protein sequence
MDSVDLEVLK TSVRWLEQGR RVLLVTVVKT WGSSPRPEGA MLALRDDGVV IGSVSGGCIE 
DDLIDRVRRE GLHYTKPEAV KYGISAEEAH RFGLPCGGTL QLVLEPLNAS SGIDALLRAV
EAGQLVARTL DMATGAATLQ HATVTDGLQF DEARLVTIHG PRYRMLVIGA GQLSRYLCQI
AVGLDYQITV CDPREEYSEE WSIPGVAMVR TMPDDTVMAM KLDERCAVIA LTHDPKLDDL
ALMEALKTPA FYVGALGSRR NNANRRERLK EFDLSDAELA RLHGPVGIYI GSRTPPEIAI
SILAEVTAAK NGVSLPTILQ VEGAKAAREI AANAASSCAV PQS