| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1405 |
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| Symbol | |
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| ID | 8019050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1483142 |
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| End bp | 1485013 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830184 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_002981365 |
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| Protein GI | 241663005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.059685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCAA GAATTGAAGA TTACGCGTTG ATTGGCGATT GCGAAACCGC GGCACTGGTT
TCGCGCGACG GCTCCATCGA TTGGCTGTGC TGGCCTCGGT TCGATTCAGG CGCCTGTTTT
GCCGCGCTGC TCGGCACGCC AGACCACGGC CGGTGGCGCA TCGCTCCGCA AGGCGAGGTC
CGCGCCACGC GCCGATGCTA TCTCCCGGGA ACGCTCGTGC TCGAAACCGT GTTCGAGACC
GAAATGGGGA GCATCAGTGT GACCGACCTG ATGACCGTGC GGCTGGCCGG CACCACAACG
CCGCGCGACG ACACATCCGA CCTCATCCGC ATCGTACGGG GGCTCTCCGG CACCGTGGAG
ATCCGCATGG ACCTCACGCT GCGCTTTGAC TACGGCACCT CCGTGCCGTG GGTCAGCCGC
ATGTCGGAGG CCACGGGTGC GACGGCCGGC AGCCCATGCG ACATGCCCGA CTGCTTGTTG
CGCGCGATCG CCGGCCCCAA CATGGTGACG CTGCACACGC CCGCGCCCAT CCGTGGCGAA
AATCTCTCCA CCGTAGCGGA TTTTTCCGTG AGCGAAGGCG AGGCGATGCC CTTCGTGCTG
ACGTACTCGC CGTCGCACCT GCCCTTGCCC GACTCCATCG ACGCACTGGA GGCGCAGGTC
GACATCGAGG CACGTTGGCG CGCGTGGTCC GGCCGCTGTC ACGGCGCTGG CGAATGGACC
GAAGCCGTAG AGCGCTCCCT GATCACGCTC AAGGCGCTCA CATACCACCG CACCGGCGGC
GTCGTGGCCG CGCCCACAAC GTCGTTGCCG GAACAGCTTG GCGGCGTGCG CAACTGGGAT
TACCGCTACT GCTGGCTGCG CGACGCCACG CTCACGCTGC TCGCGCTCAT GAATGCGGGC
TACTACAACG AGGCACGCTC GTGGCGTGAA TGGCTCGAAC GCGCCATCGC CGGCAGCCCC
GCACAAGTGC AGATCATGTA CGGCATTGCC GGCGAACGGC GCCTGGGCGA GTGGACCGTC
CCCTGGCTGC CCGGCTACGA AGGCGCGCAG CCCGTACGCG TGGGCAATGC GGCCGCGCTG
CAACTCCAGC TCGATGTGTA CGGCGAGTTG ATGGACGCCC TCTTCATCGC CCGCAAAGGC
GGCCTTGACG GGGACGATGC CTCCTGGCGC CTGCAGGTCG CGCTGATGAC CCATCTGGAG
AGCGTCTGGC AGACGCCCGA CGAAGGCATC TGGGAGATCC GGGGGCCCTC GCGCCATTTC
ACGCATTCCA AGGTCATGGC GTGGGTGGCG TTCGACCGCG CCGTCAAAAC CATCGAGCAA
TTCAATGTAG ACGGGCCCGT AGAGCGCTGG CGAGCCGTGC GCGACCGCAT CCACGCGGAG
GTCTGCGCCC ACGGCTACAA CGCCGCGCGT GGATGCTTCG TGCAGAGCTA CGGCAGCGAC
GAACTGGACG CCGCGCTTCT CATGCTGCCG CTGGTGGGTT TTCTGCCGGC ATCCGACCCG
CGCATCCAGG GCACGGTCAA GGCCATCGAA GAAGACCTGC TCGTCGATGG CCTCGTGCGC
CGCTACCGCA CCGAAGCCGT GACCGACGGC CTGCCCCAGG GCGAGGGCGT GTTCCTGGCC
TGCAGCTTCT GGTATGTCGA CAACCTCGTC ATGCAGGGTC GCCAGGACGA AGCCCGCGCG
CTCTTCACCA AGCTGTTGGC GCTGCGCAAC GACGTGGGCC TGCTGGCCGA GGAATACGAC
CCACGCGTGC AACGGCTCGT TGGCAACTTC CCGCAAGCGT TTTCGCATAT CGCGCTGGTC
AATTCCGCGC TGGCGCTATC CAAGGCGGCC GATCATGTCA GCCAGCGCAC GGGGGAACCG
CCGTGCAGCT GA
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| Protein sequence | MPSRIEDYAL IGDCETAALV SRDGSIDWLC WPRFDSGACF AALLGTPDHG RWRIAPQGEV
RATRRCYLPG TLVLETVFET EMGSISVTDL MTVRLAGTTT PRDDTSDLIR IVRGLSGTVE
IRMDLTLRFD YGTSVPWVSR MSEATGATAG SPCDMPDCLL RAIAGPNMVT LHTPAPIRGE
NLSTVADFSV SEGEAMPFVL TYSPSHLPLP DSIDALEAQV DIEARWRAWS GRCHGAGEWT
EAVERSLITL KALTYHRTGG VVAAPTTSLP EQLGGVRNWD YRYCWLRDAT LTLLALMNAG
YYNEARSWRE WLERAIAGSP AQVQIMYGIA GERRLGEWTV PWLPGYEGAQ PVRVGNAAAL
QLQLDVYGEL MDALFIARKG GLDGDDASWR LQVALMTHLE SVWQTPDEGI WEIRGPSRHF
THSKVMAWVA FDRAVKTIEQ FNVDGPVERW RAVRDRIHAE VCAHGYNAAR GCFVQSYGSD
ELDAALLMLP LVGFLPASDP RIQGTVKAIE EDLLVDGLVR RYRTEAVTDG LPQGEGVFLA
CSFWYVDNLV MQGRQDEARA LFTKLLALRN DVGLLAEEYD PRVQRLVGNF PQAFSHIALV
NSALALSKAA DHVSQRTGEP PCS
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