Gene Rpic12D_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1394 
Symbol 
ID8019039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1472452 
End bp1473090 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content65% 
IMG OID644830173 
Producthypothetical protein 
Protein accessionYP_002981354 
Protein GI241662994 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.102541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACG CCGTCAAGGA AATTTTCTAC ACGCTGCAAG GCGAGGGTGC CAACACCGGC 
CGCGCAGCCG TCTTCTGCCG CTTTGCCGGC TGCAATCTCT GGAGTGGGCG CGAAGCCGAT
CGCGCCACCG CCGTCTGCCA GTTCTGTGAC ACCGACTTCG TCGGCACGGA CGGCACGCAA
GGCGGCAAAT ACACCACCGC CGACGCACTC GCCGACACCG TCGCCGCAGA ATGGCCAGCA
AGCGCCACGG GCGGCAAGCC GCTCGTCATC TGCACCGGCG GCGAGCCGCT GCTGCAGCTC
GACAAGCCGC TGATCGACGC GCTGCATGCA CGCGGTTTCG AAATCGCCAT CGAGACCAAC
GGCACCATCA CCGTGCCGGA AGGTATCGAC TGGGTGTGCG TGAGCCCCAA GATGGGCTCC
GAACTCGTCG TCACACGCGG CGACGAGCTG AAGGTGGTGA TTCCGCAAGA CGGACAGGAC
CTCGACGCAT ACGAACGGCT CGATTTCCAG CATTTCTTCC TGCAGGCCAT GGACGGCCCG
CTTGCCCGGC AGAATACGGC GGCAGCCGTC GAGCTGTGCC AGCGCCGGCC GCGCTGGCGC
CTGTCGCTGC AAACCCATAA GATGCTGGGC ATCCGCTAG
 
Protein sequence
MTYAVKEIFY TLQGEGANTG RAAVFCRFAG CNLWSGREAD RATAVCQFCD TDFVGTDGTQ 
GGKYTTADAL ADTVAAEWPA SATGGKPLVI CTGGEPLLQL DKPLIDALHA RGFEIAIETN
GTITVPEGID WVCVSPKMGS ELVVTRGDEL KVVIPQDGQD LDAYERLDFQ HFFLQAMDGP
LARQNTAAAV ELCQRRPRWR LSLQTHKMLG IR