Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1382 |
Symbol | |
ID | 8019027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1462266 |
End bp | 1463015 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830161 |
Product | protocatechuate 3,4-dioxygenase, beta subunit |
Protein accession | YP_002981342 |
Protein GI | 241662982 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.789862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC CGCTTTCCGG CACCGGCGAA TTCGCCCAGC GCGACACCGC GCAGCACCCG CCCGCACTGA CTCCCGGCTA CAAGACCAGC GTGCTGCGCT CGCCGCGCAA CGCGCTCATC TCCACCCTGA ATACGCTGTC CGAGACCACC GCTCCGGTGT TCCAAGCCGA CGACCTGGGC GCGCTCGACA ACGATCTGAT CCTCAACTAC GCCAAGGAAG GCCTGCCGAT CGGCGAGCGC ATCATCGTCC ACGGCTACGT GCGCGACGAG TTCGGCCGCC CCGTGCCGAA CGCGCTGGTG GAGGTGTGGC AGGCCAACGC CGGCGGCCGC TACCGCCACA AGAAAGACCA GTACATCGCG CCGATCGACC CGAACTTTGG CGGCTGCGGC CGCATGCTGA CGGATGCCAA CGGTTACTAC GTCTATCGCA CCATCAAGCC GGGTCCGTAT CCGTGGCGCA ATCGCATCAA CGACTGGCGC CCGTCGCACA TCCATTACTC GCTCTCGGGC GATGGCTGGG CCCAGCGCCT GATCACGCAG ATGTACTTCG AGGGCGACCC GATGATCGCG CAATGCCCGA TCATAAAGAC CATCCCGAGC GAAGAGCAGG TGCGCGGTCT GATCGCGCTG CACGACACGG CCAACCACGT GCCGCTCGAC AGCCGCTGCT ACCGCTTCGA CATCACCTTG CGCGGCCGCC GTGCCACGCA TTTCGAAAAC GCCGTGCCCG CACTGCAAGG AGCCAAGTGA
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Protein sequence | MTLPLSGTGE FAQRDTAQHP PALTPGYKTS VLRSPRNALI STLNTLSETT APVFQADDLG ALDNDLILNY AKEGLPIGER IIVHGYVRDE FGRPVPNALV EVWQANAGGR YRHKKDQYIA PIDPNFGGCG RMLTDANGYY VYRTIKPGPY PWRNRINDWR PSHIHYSLSG DGWAQRLITQ MYFEGDPMIA QCPIIKTIPS EEQVRGLIAL HDTANHVPLD SRCYRFDITL RGRRATHFEN AVPALQGAK
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