| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1380 |
|---|
| Symbol | |
|---|
| ID | 8019025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1459775 |
|---|
| End bp | 1461163 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644830159 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_002981340 |
|---|
| Protein GI | 241662980 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.379298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTTC CGCTTTTACT CAATATCGCG ACGTTCGTCG TCATCCTGAT CGCTCTCGGC
CGTGTGAACG CGAGCTGGAG CCTGGCCAAC CGTGTGCTGC TTGGCATGGT GCTCGGTATC
CTGTTCGGAC TGGCGCTGCA CCTGATCTAT GCCGACGACA GCGCGACGCT CAAGCAGTCG
ATCTCGTGGT TCAGCATCGT TGGCGGCGGC TACATTCAGT TGCTGCAGAT GATCGTCATG
CCGCTCGTGC TGGTGTCAGT GCTGAACTCG GTGGCCAAGC TCAACAGCAC GGCGTCGCTG
GGCAAGATCA GCTTGCTGAC GATCGGCACG TTGCTGCTCA CAACGCTCAT TTCCGCGCTG
GTCGGCGTGT TCGTCACGCA CCTGTTTGGG CTGACGGCGC AAGGGCTGGT GCAGGGCGCG
CAGGAAACCG CCCGGCTGAG CGCCATCCAG GACAACTATG TCGGCAAGGT GGCCGACCTG
TCGGTGCCGC AGCTGGTGCA GTCCTTTATT CCGAAGAACC CGTTTGCCGA GCTGACCGGC
GCCAAGCCGA CGTCCATCAT CGGCGTGGTG ATCTTTGCGG CGTTCCTGGG CGTGGCTGCG
TTGAACCTGC TCAAGGATGA TGCGGTGAAA GGCGAGCGCG TGCTGACCGC CATTGATACC
GCGCAGGCCT GGGTGATGAA GCTCGTGCGG CTCGTCATTC GCCTGACCCC ATACGGCGTG
CTCGCGCTCA TGACGAACGT GGTGGCCGTG TCCAACGTGC AGGACATCAT CAAGCTCGGG
GGTTTCGTGG TGGCGTCTTA CCTGGGCCTG GCCATCATGT TCGGCGTGCA TGCTGTGCTG
CTCACGCTTA ATGGCATCAA TCCGCTCCGC TTCTTCCGCA AGGTCTGGCC GGCGCTGTCG
TTCGCGTTCA CGAGCCGGTC CAGTGCGGCC ACCATTCCGC TGAGCATCGA GGCTCAGACG
CGGCGCATTG GTGTGCCGGA ATCGATTGCC AGTTTCGCTG CATCGTTTGG CACGACCATT
GGCCAGAACG GCTGCGCGGG CCTGTATCCC GCCATGCTGG CAGTGATGGT GGCGCCCACC
GTGGGCATCA ACCCGTTCGA TCCTGTATGG ATTGCAACGC TCGTGGCGGT GGTCACGCTC
AGCTCGGTCG GCGTGGCGGG TGTGGGCGGC GGCGCCACGT TTGCAGCGTT GATCGTGCTG
CCGGCGATGG GCTTGCCGGT GACGCTCGTG GCACTGCTGA TCTCCATCGA ACCGCTGATC
GACATGGGCC GTACCGCGCT CAACGTCAAC GGCTCGATGA CCGCCGGGAC GATCACCAGC
CAGTTGCTGG GGCAGACCGA TCGCAGTGTC TTCGATGCTG CCGATGATGT GGAGATGGCA
CACCGCTGA
|
|---|
| Protein sequence | MNLPLLLNIA TFVVILIALG RVNASWSLAN RVLLGMVLGI LFGLALHLIY ADDSATLKQS
ISWFSIVGGG YIQLLQMIVM PLVLVSVLNS VAKLNSTASL GKISLLTIGT LLLTTLISAL
VGVFVTHLFG LTAQGLVQGA QETARLSAIQ DNYVGKVADL SVPQLVQSFI PKNPFAELTG
AKPTSIIGVV IFAAFLGVAA LNLLKDDAVK GERVLTAIDT AQAWVMKLVR LVIRLTPYGV
LALMTNVVAV SNVQDIIKLG GFVVASYLGL AIMFGVHAVL LTLNGINPLR FFRKVWPALS
FAFTSRSSAA TIPLSIEAQT RRIGVPESIA SFAASFGTTI GQNGCAGLYP AMLAVMVAPT
VGINPFDPVW IATLVAVVTL SSVGVAGVGG GATFAALIVL PAMGLPVTLV ALLISIEPLI
DMGRTALNVN GSMTAGTITS QLLGQTDRSV FDAADDVEMA HR
|
|---|
| |