Gene Rpic12D_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1364 
Symbol 
ID8019009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1447052 
End bp1447981 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content61% 
IMG OID644830144 
Productband 7 protein 
Protein accessionYP_002981325 
Protein GI241662965 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.216615 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAGC TGGGGACTCT CGCGATCATC GTCCTGTTTG CTGCCATCGT GCTCATTGCA 
CAAGGCATCA AGATCGTGCC GCAACAGCAC GCCTGGATTC TGGAGCGGTT GGGCAAGTAT
CACGCGACGC TTTCGCCGGG GCTGAATATC GTGCTGCCCT TTGTCGATCG CGTTGCCTAC
AAGCACGTGC TCAAGGAAAT CCCGCTCGAC GTGCCGAGCC AGATCTGTAT CACCAAGGAC
AACACGCAGC TGCAGGTGGA CGGCATCCTC TACTTCCAGG TGACCGACCC GATGCGGGCT
TCGTATGGCT CCAGCAACTT CGTGATCGCC ATCACCCAGC TCGCGCAGAC GACGCTGCGC
TCGGTCGTCG GCAAGCTGGA GCTGGACAAG ACGTTTGAAG AGCGCGACTT CATCAACCAC
AGCGTGGTCA ACGCGCTGGA TGAGGCGGCA TCGAACTGGG GCGTGAAGGT GCTGCGCTAC
GAAATCAAGG ATCTGACCCC GCCGAAGGAA ATCCTGCACG CCATGCAGGC GCAGATTACG
GCCGAGCGTG AGAAGCGTGC GCTGATCGCC GCATCTGAAG GCAAGCGCCA GGAGCAGATC
AACCTGGCAT CCGGTGCGCG GGAGGCCGCC ATCCAGAAAT CAGAAGGGGA AAAGCAGGCC
GCCATCAACA GGGCACAGGG TGAAGCGGCG GCGATCCTGG CGGTGGCTGA AGCCAACGCC
CAGGCGATCC AGAAGATCGG TCACGCCATT CGCACCGAAG GGGGCATCGA TGCGGTCAAC
CTGAAAGTGG CGGAAGAGTA TGTGAGCGCG TTCGGCAACC TGGCGAAGCA GGGCAACACG
CTCATCGTGC CGGGCAACAT GGGCGACCTG AGCACGATGA TTGCGTCAGC GTTGACGATT
GTGAAGCAGC AGCAGCGGCC GGGCGCGTAA
 
Protein sequence
MFELGTLAII VLFAAIVLIA QGIKIVPQQH AWILERLGKY HATLSPGLNI VLPFVDRVAY 
KHVLKEIPLD VPSQICITKD NTQLQVDGIL YFQVTDPMRA SYGSSNFVIA ITQLAQTTLR
SVVGKLELDK TFEERDFINH SVVNALDEAA SNWGVKVLRY EIKDLTPPKE ILHAMQAQIT
AEREKRALIA ASEGKRQEQI NLASGAREAA IQKSEGEKQA AINRAQGEAA AILAVAEANA
QAIQKIGHAI RTEGGIDAVN LKVAEEYVSA FGNLAKQGNT LIVPGNMGDL STMIASALTI
VKQQQRPGA