Gene Rpic12D_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1363 
Symbol 
ID8019008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1446577 
End bp1447002 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID644830143 
Productprotein of unknown function DUF107 
Protein accessionYP_002981324 
Protein GI241662964 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0778838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTC AGACCGTCTG GTTTTCGCTG GCCGTGCTGC TCGTCATCGG CGAGCTGATG 
ACGGGCACCT TCTATCTGCT GATGGTCGCG ATTGGGCTGA TTGCCGGCGG TCTTGCCGCG
CTGATCGGCC TTGCATTTCC TGCGCAGGCG ATCGTTGCCG CCATCGTGGC GGTATTCGGC
ATCGTCGGGC TGCGGCGTAC GCGCTACGGG CGCGCCACGC GCGAAAATGC CGCCCGCAAC
CGCAACGTCA ATCTGGATAT CGGCGAGACA TTGCGCGTCG ATGCCTGGTC ACCCGAGCGG
CGTGCACGCG TGCAATATCG CGGCGCGGCG TGGGACGTCG AATTGGCGCC AAATGCGCCG
GCTACCGTCG GTGAATTCCG GATCGTTGAA GTGCGCGGCA ACGTGCTCGT CGTCACGCCC
AAATAG
 
Protein sequence
MSAQTVWFSL AVLLVIGELM TGTFYLLMVA IGLIAGGLAA LIGLAFPAQA IVAAIVAVFG 
IVGLRRTRYG RATRENAARN RNVNLDIGET LRVDAWSPER RARVQYRGAA WDVELAPNAP
ATVGEFRIVE VRGNVLVVTP K