Gene Rpic12D_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1345 
Symbolfrr 
ID8018990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1426151 
End bp1426711 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID644830125 
Productribosome recycling factor 
Protein accessionYP_002981306 
Protein GI241662946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0459515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.505766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCG CCGATGTCAA AAAGAATGCC GAGCAGAAGA TGCAGAAGTC GATCGATGCT 
CTGAAGACGG ATCTGGCCAA GATCCGTACT GGCCGTGCCC ACACCGGTCT GCTCGATCAC
GTGCAAGTCG ACTACTACGG CTCGATGGTG CCGATCAGCC AGGTTGCCAA CGTGACGCTG
GTGGATGCGC GCACGATTGG CGTGCAACCG TGGGAAAAGA AGATGGTGCA AGCCGTCGAG
AAGGCCATCC GCGAAGCGGA CCTCGGCCTG AACCCCGCCA CGATGGGCGA CATCATTCGC
GTGCCGACCC CCGCACTCAC CGAAGAGCGC CGCAAGGAGC TGACCAAGGT CGTGAAGGGC
GAGGGCGAGG ATGCCAAGGT CGCCGTGCGC AACTTGCGTC GCGATGCCAA CGAACAGCTC
AAGAAGCTGG TGAAGGACAA GGCGATCTCG GAAGACGACG AGCGTCGCGG TGGTGACGAC
ATTCAGAAGC TGACCGACAA GTTCGTCGCC GAGATCGACA AGCTGGTCGC CGAGAAAGAC
AAGGAAATCA TGACGGTGTA A
 
Protein sequence
MSVADVKKNA EQKMQKSIDA LKTDLAKIRT GRAHTGLLDH VQVDYYGSMV PISQVANVTL 
VDARTIGVQP WEKKMVQAVE KAIREADLGL NPATMGDIIR VPTPALTEER RKELTKVVKG
EGEDAKVAVR NLRRDANEQL KKLVKDKAIS EDDERRGGDD IQKLTDKFVA EIDKLVAEKD
KEIMTV