Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1320 |
Symbol | |
ID | 8018965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1395783 |
End bp | 1396706 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830100 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002981281 |
Protein GI | 241662921 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.525141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACT ACTTCATTAA ACGTGCGCTG GGCGTGATCC CGACACTGCT GATCGTGGCA GTGCTGGTGT TCCTGTTCGT GCATCTGTTG CCCGGCGACC CGGCGCGTTT GGCCGCCGGC CCCGAAGCGG ACGAGACGAC GGTCGATCTC GTACGCAAGG ACCTGGGCCT GGACAAGCCG ATGCACGAGC AGTTCGTGCG CTTCTTCGCC AACGCCGCTC GCGGTGAGTT CGGCAACTCC ATCCGCACCA AGCGTCCGGT GAGCGAAGAG ATTGGCGAGC GCTTCTGGCC AACGCTCAAC CTGACGATCA CCAGCATGGT GTGGGCGGTG GTCTTCGGCA TGGTGATCGG CATCACATCC GCCGTGTGGC GCAACAAGTG GCCGGACCGC CTGGGCATGA CGCTCGCCGT GTCGGGCATT TCGTTCCCCG CGTTCGCACT GGGCATGCTG CTGATGGAAG TGTTCTCGGT GCAGCTTGGC TGGCTGCCAG CCATCGGTGC GGACACCTGG AAGCACTACA TCCTGCCCTC GCTCACGCTG GGCGCTGCGG TGGCCGCCGT GATGGCGCGC TTCACGCGTG CGTCGTTCGT GGAAGTGCTG CAGGAAGATT TCGTGCGCAC CGCCCGTGCC AAAGGCGTGC GCGAGACTGT GGTGGTCATC AAGCATTGCC TGCGCAACGC GATGATCCCG GTGGTCACGA TGATGGGCCT GCAGTTCGGT TTTCTGCTGG GCGGCTCGAT TGTCGTGGAG AAGGTGTTCA ACTGGCCAGG CCTCGGCCGT CTGCTGGTGG ATGCGGTGGA AATGCGCGAC TACCCGGTCA TCCAGGCCGA GGTGCTGCTG TTCTCGCTGG AGTTCATCCT GATCAACCTC GTGGTGGACA TGCTTTACAC CGTCATCAAC CCCACCATCC GCTACAAGAA GTAA
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Protein sequence | MLNYFIKRAL GVIPTLLIVA VLVFLFVHLL PGDPARLAAG PEADETTVDL VRKDLGLDKP MHEQFVRFFA NAARGEFGNS IRTKRPVSEE IGERFWPTLN LTITSMVWAV VFGMVIGITS AVWRNKWPDR LGMTLAVSGI SFPAFALGML LMEVFSVQLG WLPAIGADTW KHYILPSLTL GAAVAAVMAR FTRASFVEVL QEDFVRTARA KGVRETVVVI KHCLRNAMIP VVTMMGLQFG FLLGGSIVVE KVFNWPGLGR LLVDAVEMRD YPVIQAEVLL FSLEFILINL VVDMLYTVIN PTIRYKK
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