| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1319 |
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| Symbol | |
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| ID | 8018964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1394147 |
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| End bp | 1395712 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830099 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002981280 |
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| Protein GI | 241662920 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0396363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATC GCTTTGCCCA CCGAGTCGCA TTCGGCCCGC GCGCAGCCAT GGTTGCCAGC
GGCCTGGCCC TGGCGGCATT CACCATGCCG GCCTTTGCCG CCAAGGACGC CGTGATGGCG
GTCTACTCGA CCTTCACCAC GATGGACCCG TACGACGCCA ACGACACGCT GTCGTTCAGC
GCGGCCAAGT CGTTCTATCA AGGCCTGTTC GGCTTCGACA AGGACATGAA GCTGGTCAAC
GTGCTGTGCG ACAGCTACGA GGTCAGCAAG GACGGCCTGG TCTATACGTT CAAGCTGCAC
AAGGGCGTGA AATTCCACGA CGGGACCACG TTTGATGCCA ACGCCGTCAA GGCCAACCTG
GACCGCGTGA CGGACCCGGC CAACAAGCTC AAGCGTTTCG TGCTGTTCAA TCGCGTGGCG
AAGACCGAAG TGGTCGATCC GTACACCGCC CGCGTGACGC TCAAGGAGCC GTTCTCGCCG
TTCATCAACG TGCTGGCCCA TCCGTCGGCG GCGATGATCT CGCCCACGGC GCTCAAGAAG
TACGGCAAGG ACATCGCGTT CCACCCGGTC GGCACCGGCC CGTTCGAATT TGTCGAGTGG
AAGCAGACCG ACTACCTGAA GGGCAAGAAA TTCGACGGCT ACTGGAAACA CGGCCTGCCG
AAGATCGACA CCATCACCTG GAAGCCGGTG GTCGACAACA ACACGCGCGC CACCATCATG
CAGACGGGCG AGGCCGACTT TGCGTTCACG ATTCCGTTCG AGCAGGCCGC GGTGCTCAAG
AGCAGCCCGA AGGTTGACCT GATTGCAGCG CCGTCGATCA TCCAGCGCTA TGTCAGCTTG
AACACCAACG TGAAGCCGTT CGACAACCCC AAGGTGCGCC AGGCCATCAA CTACGCCATC
AACAAGGATG CGCTGACCAA GGTGGCGTTT GCGGGCTACG CCGTGCCGTC TGAAGGCGTG
GTGCCGCCGG GCGTTGACTA CGCCGTCAAG TTGGGCCCGT GGCCGTACAA CCCGGCCAAG
GCGAAAGAAC TGCTGAAGGA AGCGGGTTAC CCGAACGGCT TCGAGACGCA ACTGTGGTCG
GCCTACAACC ACACGACGGC GCAGAAGATC ATCCAGTTCG TGCAGCAGCA ACTGGCGCAG
GTCGGCATCA AGGCCTCGGT GCTGGCGTTG GAAGCGGGCC AGCGCGTCGA GCGCGTGGAA
AGCGTGCCCA AGCCCGAAGA CGCCGGCGTG CGCATGTACT ACGCAGGCTG GTCGTCGTCG
ACGGGTGAAT CGGATTGGGC GCTGCGTCCG CTGCTGGCGT CCGAAGCCAT GCCGCCCAAG
TCGTTCAACA CGGCGTACTA CAAGAACGAG CAGGTCGATG CCGACATCGC CGGCGCGCTG
CGCACGACCG ATCGCGCAGA GAAGTCGAAG CTCTACACCG ACGCGCAGAA GCGCATCTGG
GAAGACGCAC CGTGGGCCTT CCTGGTGACG GAGAAGATCG TCTACGCGCG CTCGAAGCGT
CTGTCGGGTG CCTATGTGGC ACCGGACGGC TCGTTCAGCT TTGAAGACGT TGACATCAAG
CAATAA
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| Protein sequence | MFNRFAHRVA FGPRAAMVAS GLALAAFTMP AFAAKDAVMA VYSTFTTMDP YDANDTLSFS
AAKSFYQGLF GFDKDMKLVN VLCDSYEVSK DGLVYTFKLH KGVKFHDGTT FDANAVKANL
DRVTDPANKL KRFVLFNRVA KTEVVDPYTA RVTLKEPFSP FINVLAHPSA AMISPTALKK
YGKDIAFHPV GTGPFEFVEW KQTDYLKGKK FDGYWKHGLP KIDTITWKPV VDNNTRATIM
QTGEADFAFT IPFEQAAVLK SSPKVDLIAA PSIIQRYVSL NTNVKPFDNP KVRQAINYAI
NKDALTKVAF AGYAVPSEGV VPPGVDYAVK LGPWPYNPAK AKELLKEAGY PNGFETQLWS
AYNHTTAQKI IQFVQQQLAQ VGIKASVLAL EAGQRVERVE SVPKPEDAGV RMYYAGWSSS
TGESDWALRP LLASEAMPPK SFNTAYYKNE QVDADIAGAL RTTDRAEKSK LYTDAQKRIW
EDAPWAFLVT EKIVYARSKR LSGAYVAPDG SFSFEDVDIK Q
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