Gene Rpic12D_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1297 
Symbol 
ID8018942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1369960 
End bp1370694 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content67% 
IMG OID644830077 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_002981258 
Protein GI241662898 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0750406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.408598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCC GCATCATCAA TCCCAACACC ACGACGAGCA TGACCGCGCT CATCGGCCGC 
TGCGCGCAAG CCGCGGCCGC ATCGGGCACG CGCATCGCGG CGGTGAGCCC GAAGATGGGC
CCGGCTTCCA TCGAAAGCCA TTACGACGAA GCGCTCTCGG TGCCCGGCAT CCTGGAAGAA
ATCCGCCACG GCGAACGCGA TGGCGCCGAT GCCTACGTCA TCGCCTGCTT CGGCGATCCG
GGCCTCTACG CTGCACGTGA ACTCGCGCAC GGTCCCGTGA TCGGTATCGC TGAAGCGGCC
ATGCACATGG CGAGCCTGAT CGGCAACAGC TTCAGCGTGG TGACGACGCT CGAGCGCACC
GTCGGCATGG CCTGGCATCT GGCCGAGCGC TACGGCATGC GGCATGCGTG CCGCAACGTC
CATGCAAGCG ACCTGCCCGT GCTGGACCTG GAGAAACCCG GCTCCAACGC ACGCCAGATC
ATCCTCGAAG CCTGCCGCAG CGCGCTCGCG CAAGACCGCA GCGACTGCAT CGTGCTCGGC
TGTGCCGGCA TGGCCGACCT CTGCGAAGAC CTGAGCGCCG AGCTGCACGT GCCGGTCATC
GACGGTGTGG TGGCTGCGGT GAAGCTGGTC GAGGCGCTGG TCGGCATGCG GCTTTCCACC
AGCAAGCGCG GCGACTGGGC CCGGCCCCTT CCGAAACCCT ATACCGGGAT GCTTGCCCCG
TTTGCGTTGG CGTAG
 
Protein sequence
MDIRIINPNT TTSMTALIGR CAQAAAASGT RIAAVSPKMG PASIESHYDE ALSVPGILEE 
IRHGERDGAD AYVIACFGDP GLYAARELAH GPVIGIAEAA MHMASLIGNS FSVVTTLERT
VGMAWHLAER YGMRHACRNV HASDLPVLDL EKPGSNARQI ILEACRSALA QDRSDCIVLG
CAGMADLCED LSAELHVPVI DGVVAAVKLV EALVGMRLST SKRGDWARPL PKPYTGMLAP
FALA