Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1276 |
Symbol | |
ID | 8018921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1350489 |
End bp | 1351481 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830056 |
Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
Protein accession | YP_002981237 |
Protein GI | 241662877 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.577364 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.218021 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC ACTCGCCCCT GCGCAGGACT TTGACCATTG CCGCCACGCT GCTTGCAACG CTTGGCGTGC CCGCCGCATT TGCCAACAGC GATGCCCCGC CCCCGACCGC AGCCAAACAA CTGCGCATCG GCTATCAGAA ATACGGCACG CTGACGGTGC TCAAGGCGCG CGGCACGTTG GAAAAGCGTC TGGCCGTCCA GGGCATCGAA GTGAAGTGGA CCGAGTTTCC GGCCGGCCCG CAGCTGCTGG AAGGCCTGAA CGTGGGCGCC ATCGATTTCG GCACCACGGG TGAAGCACCG ACGATCTTCG CGCTGGCTGC CGGGGCGCAC CTCGTCTATG TCGGCAACCA GCCGCCCGCG CCGGCCGGCG AGGCGATCAT CGTGCCGAAG ACTTCGCCGC TCAAGAGCGT GGCCGATCTC AAAGGCAAGC GCGTTGCCTT CAACAAGGGC TCGAACGTGC ATTACCTGCT GGTGAAGCTG CTGGAAAAGG CCAATGTGCC CTACAGCGAT ATCCAGCCTG TGTACCTCAC GCCCGCCGAT GCGCGTGCCG CCTTCGAGCG CGGCGCCATC GACGCCTGGG TGATCTGGGA TCCGTTCTTT GCCGCGGCCG AACAGCAACT GGGCGCGCGC GTGCTGGCCG ACGGCACGGG CGTGGTCAAC AACTCGCAGT ACTTCCTGGC GTCGAAGGGC TATGCGGGCG CGCGGCCCGA TGTGCTGAAC ATCGTGCTCG ATGAACTGAA GAAGACCGAC ACCTGGGCAG CGGCCAACCC GAAGGAAGTC ACGACCATTC TCGGCCCGCA GCTCGGCCTG GAGCCCGCCG TGGTGGCGCG TTCGGTGTCG CGCATTTCGT ATGGCATCCA GCCCGTGGGC GCCGAGGCGT TGGCCGACCA GCAGCGCATT GCCGATACGT TCCACGCGCT CAAGCTGATT CCGCGCCCCG TGAAGGTGGC CGACTCTGCG TGGCAGCCCA CGACGCAACA GGCAGCGCGC TGA
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Protein sequence | MKTHSPLRRT LTIAATLLAT LGVPAAFANS DAPPPTAAKQ LRIGYQKYGT LTVLKARGTL EKRLAVQGIE VKWTEFPAGP QLLEGLNVGA IDFGTTGEAP TIFALAAGAH LVYVGNQPPA PAGEAIIVPK TSPLKSVADL KGKRVAFNKG SNVHYLLVKL LEKANVPYSD IQPVYLTPAD ARAAFERGAI DAWVIWDPFF AAAEQQLGAR VLADGTGVVN NSQYFLASKG YAGARPDVLN IVLDELKKTD TWAAANPKEV TTILGPQLGL EPAVVARSVS RISYGIQPVG AEALADQQRI ADTFHALKLI PRPVKVADSA WQPTTQQAAR
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