| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1250 |
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| Symbol | |
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| ID | 8018895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1321578 |
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| End bp | 1322324 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830030 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_002981211 |
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| Protein GI | 241662851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000552171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.790948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGC GGCACAGCTT TTCCCCCACC AATACCCGAC TGGCAGGTCC TGCCCTGCTT
GCGCTGGTGT GCCTGCTGTC TGCCTGTTCG TCCACGCCGA CCCGCTCCAC CGCCTCGCGA
GACGCGGGCC TGCGCACACG TGGCGCACCG ATTCAGGATC CGAGCGCCGG TCTGGAAGAA
ATCTCGATCG AAGCCATGGC GCTGGTCGGC ACGCCCTACC GCTACGGCGG CAATACGCCC
GACAGCGGCT TCGATTGCAG CGGACTGGTG CGCTACGTCG TGCAGCGCGC CGCTGCCGTG
AACCTGCCGC GCACCGCCGC CGAAATGGGT CGCCGCGGCA CGTCATTGGA CCGCCGCGAC
GTTGCATCGG GCGACCTCGT CTTCTTCAAC ACGACGGGCC AACCCAATTC GCACGTGGGC
ATCTACGTTG GCCAGAACCG GTTTGTTCAT GCACCAGCGA CCGGCGGCAC AGTGCGACTG
GAAGACATGA CCAAGTCGTA CTGGGCCAGC CGCTATGTGG GCGCACGACG CGTCGTCGCC
GTGAGCAACC TGCCCGACTC ACCAGCGCCG ACCGCACCGA TGACGCCGGC ACCGGCCAGC
CCCGCTCGCC CGATCGATGA TGATCCGCTC GGTACCCTTG CCCGTGCGCG CGATGCTCAA
GCCGATAGCC TGATGTCGAC GCGTGGGCCA GCCACTGCAA CGACTCCCGC AGAAGACGAC
CCCATCGCTC GCTTCGCCAC GCAATAG
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| Protein sequence | MLTRHSFSPT NTRLAGPALL ALVCLLSACS STPTRSTASR DAGLRTRGAP IQDPSAGLEE
ISIEAMALVG TPYRYGGNTP DSGFDCSGLV RYVVQRAAAV NLPRTAAEMG RRGTSLDRRD
VASGDLVFFN TTGQPNSHVG IYVGQNRFVH APATGGTVRL EDMTKSYWAS RYVGARRVVA
VSNLPDSPAP TAPMTPAPAS PARPIDDDPL GTLARARDAQ ADSLMSTRGP ATATTPAEDD
PIARFATQ
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