Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1240 |
Symbol | |
ID | 8018885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1313754 |
End bp | 1314404 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830020 |
Product | LexA repressor |
Protein accession | YP_002981201 |
Protein GI | 241662841 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0593225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCC TCACCCCCCG CCAGCAGCAG ATTTATGACC TCATCCGCCA GACGACCCAG CGCACGGGCT TTCCGCCCAC GCGCGCCGAG ATTGCCGCGG AGTTTGGCTT CTCGTCGCCC AATGCGGCTG AGGAACACCT GCGCGCGCTG GCACGCAAGG GCGTGATCGA ACTGACGCCG GGCGCCTCAC GTGGCATTCG GCTGCGGGCG GCAGGCGAGA CGGCGCAGCA TCAGTTCTCG CTGCCGTCGA TGGGGCTGAT GCAATTGACT CTTCCGCTAG TGGGCCGTGT GGCCGCCGGT AGTCCGATCC TGGCTGCGGA GCACATTGAT CGCCAGTATC AGGTTGATCC ATCGCTGTTT TCTGCGCAGC CCGATTTTCT GCTGAAGGTG CGTGGTATGA GCATGCGCGA CGCCGGCATT CTCGATGGCG ATCTGCTGGC CGTGCAGCGC GCCAGTGAAG CCCCCAACGG CAAGATCGTC GTGGCTCGAC TGGGCGACGA CGTCACGGTC AAGCGCTTCC AGCGCAAGGG CCGCCATGTC GAACTGATTG CCGAGAATCC CGATTTCGAA CCGATCCACG TTGATCTGGA TCGTGATGAG TTTCACCTGG AGGGCTTGGC CGTCGGTCTG ATCCGGCCTG CTGCTCCGTA A
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Protein sequence | MATLTPRQQQ IYDLIRQTTQ RTGFPPTRAE IAAEFGFSSP NAAEEHLRAL ARKGVIELTP GASRGIRLRA AGETAQHQFS LPSMGLMQLT LPLVGRVAAG SPILAAEHID RQYQVDPSLF SAQPDFLLKV RGMSMRDAGI LDGDLLAVQR ASEAPNGKIV VARLGDDVTV KRFQRKGRHV ELIAENPDFE PIHVDLDRDE FHLEGLAVGL IRPAAP
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