Gene Rpic12D_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1217 
Symbol 
ID8018861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1293179 
End bp1294999 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content63% 
IMG OID644829999 
ProductGTP-binding protein TypA 
Protein accessionYP_002981181 
Protein GI241662821 
COG category[T] Signal transduction mechanisms 
COG ID[COG1217] Predicted membrane GTPase involved in stress response 
TIGRFAM ID[TIGR01394] GTP-binding protein TypA/BipA
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC TTCGCAACAT CGCCATCATT GCCCACGTTG ACCACGGCAA AACCACACTG 
GTCGACCAGC TCCTTCGCCA AGCCGGCACG TTCCGCGAGA ACGAACAGAT CGCCGAGCGC
GTGATGGATT CGAACGACAT CGAAAAAGAG CGCGGCATCA CGATCCTGGC CAAGAACTGC
GCGGTCGAAT ACAACGGCAC GCACATCAAC ATCGTCGACA CGCCGGGGCA CGCGGACTTC
GGTGGTGAAG TGGAGCGTGT GCTCTCGATG GTCGATGGTG TGCTGCTGCT GGTGGATGCC
GTGGAAGGCC CGATGCCGCA AACGCGTTTT GTGACGCGCA AGGCGCTGGC CCTGGGCCTG
AAACCGATCG TCGTGATCAA CAAGGTGGAC CGCCCGGGCG CGCGTCCGGA GTGGGTGATC
AACCAGACCT TCGACCTGTT CGACAAGCTG GGCGCCAATG ATGACCAACT CGATTTCCCG
GTGGTGTATG CATCGGGCCT GAACGGCTAC GCCGGCCTGA CCGACGACGT GCGCGAAGGC
GACATGAAGC CGCTGTTCGA GACCATTCTC GACAAGGTGC CGCAGCGTAA CGACGACCCG
AACGGTCCGT TCCAACTGCA GATCATCTCG CTGGACTACT CGAGCTACGT CGGCAAGATC
GGCGTTGGCC GCATTACGCG TGGCCGCGTG CGTCCGCTGC AGGACGTGGT GGTCAAGTTC
GGCCCGGAAG GCAACCCGAT CAAGGGTCGT ATCAATCAGG TGCTGAAGTT CCGCGGTCTG
GAGCGCGAAC TGGTGCAGGA AGCCGAAGCT GGCGACATCG TGCTGATCAA CGGTATTGAA
GAACTGGGCA TCGGCTGCAC CGTGTGTGCG CCGGACGCCC AGGAAGCCCT GCCGATGCTG
AAGGTGGACG AGCCGACGCT GACGATGAAC TTCTGCGTCA ACACCTCGCC GCTGGCAGGC
CGTGAAGGCA AGTTCGTGAC GAGCCGCCAG CTGCGCGACC GTCTGGACCG TGAGCTGAAG
TCGAACGTGG CACTGCGCGT GAAGGACACC GGCGACGACA CGGTTTTCGA AGTGTCGGGC
CGTGGCGAAC TGCACCTGAC GATTCTGGTG GAAAACATGC GTCGTGAAGG CTATGAGCTG
GCCGTGTCGC GCCCGCGCGT GGTGTTCAAG GAAATCGACG GCGTGAAGTG CGAGCCGTTC
GAGCGCCTGA CCGTGGACGT GGAAGACAGC CACCAGGGCG GCGTGATGGA AGAACTTGGC
CGCCGCAAGG GCGAACTGCT CGACATGGCC TCGGACGGCA AGGGCCGCAC GCGTCTGGAA
TACCGCATTC CGGCCCGCGG CCTGATCGGC TTCCAGGGTG AATTCCTGAC GCTGACGCGC
GGCACCGGGC TGATCAGCCA CATTTTCGAC GATTATTCGC CGGTCAAGGA AGGCGACCTG
GGCGAGCGCC ACAACGGTGT GCTGATCTCG CAGGACGACG GCGCTGCCGT GGCCTACGCA
CTGTGGAAGC TGCAGGACCG CGGCCGCATG TTCGTGTCGC CGGGCGACGC GCTGTACGAA
GGCATGATCA TTGGCATCCA CAGCCGCGAC AACGATCTGG TCGTCAACCC GATCAAGGGC
AAGCAGCTGA CCAACGTGCG TGCGTCGGGT ACCGACGAAG CCGTGCGCCT GGTCCCGCCG
ATTCAGATGT CGCTGGAATA CGCGGTGGAA TTCATCGCCG ACGACGAGCT GGTGGAAGTC
ACGCCGAAGA GCATCCGCCT GCGCAAGCGT CACCTGAAAG AGCACGAGCG CAAGCGCGCA
TCGCGCGAAG AGGCGGTCTG A
 
Protein sequence
MRALRNIAII AHVDHGKTTL VDQLLRQAGT FRENEQIAER VMDSNDIEKE RGITILAKNC 
AVEYNGTHIN IVDTPGHADF GGEVERVLSM VDGVLLLVDA VEGPMPQTRF VTRKALALGL
KPIVVINKVD RPGARPEWVI NQTFDLFDKL GANDDQLDFP VVYASGLNGY AGLTDDVREG
DMKPLFETIL DKVPQRNDDP NGPFQLQIIS LDYSSYVGKI GVGRITRGRV RPLQDVVVKF
GPEGNPIKGR INQVLKFRGL ERELVQEAEA GDIVLINGIE ELGIGCTVCA PDAQEALPML
KVDEPTLTMN FCVNTSPLAG REGKFVTSRQ LRDRLDRELK SNVALRVKDT GDDTVFEVSG
RGELHLTILV ENMRREGYEL AVSRPRVVFK EIDGVKCEPF ERLTVDVEDS HQGGVMEELG
RRKGELLDMA SDGKGRTRLE YRIPARGLIG FQGEFLTLTR GTGLISHIFD DYSPVKEGDL
GERHNGVLIS QDDGAAVAYA LWKLQDRGRM FVSPGDALYE GMIIGIHSRD NDLVVNPIKG
KQLTNVRASG TDEAVRLVPP IQMSLEYAVE FIADDELVEV TPKSIRLRKR HLKEHERKRA
SREEAV