Gene Rpic12D_1204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1204 
Symbol 
ID8018848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1276406 
End bp1277134 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID644829986 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002981168 
Protein GI241662808 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCACTC GAATCGCACT TACCGACCAC GCCTCGCGTT GCTCCACCTG TGTACTCGGG 
CAAATCTGCC TGCCGGTGGG AATGAACTCG GACGACGTGC GCAAGATGGA CGATTTGGTC
AGCGAGCGCA TCCGCATTAA GAAGGGGCAA TCGCTCTATT CCCTGGGGGA GCCGCTCGAA
GCGGTTTACG GCATTCGTTT CGGTACGCTC AAAACCCATC TGACGCTGGA AGACGGTCGA
CACCAGATCA CGGGGTTCCA CCTGCCGGGT GAGATCGTCG GGCTCGATGG CATTGGCGAT
ATGCGCCATG TGTCGGATGC CACCGCGCTC GAAGATACCG AAGTCTGCGT GGTGCGCTAC
GACGAGCTGC AACACCTTTC GCGCCGGCTG CCTTCGCTGC AGCATCAGTT CCTGCGCATC
ATGAGCAAGG AGATTTCGCA GGATCACCTG ATGCTGCTCA CGCTGGGTTC CATGCGTGCG
GAGGAGCGTC TCGCAGCGTT CCTGCTTAAC CTCTCGAAGC GTTCGGCCCA GCGGGGATAT
TCGTCAACAG AGTTTGTGCT GCGCATGAGC CGCGAAGAGC TGGGCAGCTA TCTGGGTCTC
AAGCTCGAAA CCGTCAGCCG CCTGTTCTCG CGCTTTGCCG AAGCGGGCCT CATTCAGATC
CGCCAACGCC ATGTCAAGCT GATCGACCTG GCCGGCCTGC GCCAGGTCAT GAGCGGTCAA
GCCGCTTGA
 
Protein sequence
MLTRIALTDH ASRCSTCVLG QICLPVGMNS DDVRKMDDLV SERIRIKKGQ SLYSLGEPLE 
AVYGIRFGTL KTHLTLEDGR HQITGFHLPG EIVGLDGIGD MRHVSDATAL EDTEVCVVRY
DELQHLSRRL PSLQHQFLRI MSKEISQDHL MLLTLGSMRA EERLAAFLLN LSKRSAQRGY
SSTEFVLRMS REELGSYLGL KLETVSRLFS RFAEAGLIQI RQRHVKLIDL AGLRQVMSGQ
AA