Gene Rpic12D_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1179 
Symbol 
ID8018823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1248444 
End bp1249859 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content61% 
IMG OID644829961 
Productglutamine synthetase, type I 
Protein accessionYP_002981143 
Protein GI241662783 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAA GCATTGCAGA CGTGATGAAG CTCGTGAAGG AAAACGACGT CAAGTTCGTC 
GATTTCCGCT TCACCGATAC CAAGGGTAAG GAGCAGCACG TCTCGGTCCC CGTTTCGCAT
TTCGACGAAG ACAAGTTCGA AAGCGGTCAC GCATTCGACG GCTCGTCGAT CGCCGGCTGG
AAAGGCATCG AAGCGTCGGA CATGCTGCTG GTGCCGGATG CAAACACCGC GCACATCGAC
CCGTTCTACG AAGAGCCGAC CCTGGTCCTG ACCTGCGACG TGGTCGAGCC GTCGGACGGC
AAGGGCTACG ACCGCGACCC GCGCTCGATC GCCAAGCGCG CTGAAGCCTA CCTGAAGAGC
ACCGGCCTGG GCGACACCGC CTACTTTGGT CCGGAACCCG AATTCTTCAT CTTCGACGGC
GTGACCTGGA ACATCGACAT GCAGGGTTGC TTCGTGAAGA TCAATTCCGA AGAAGCACCG
TGGTCGTCGG GCAAGGAGTT CGAACACGGC AACTCGGGCC ACCGTCCGGG CAAGAAGGGC
GGCTACTTCC CGGTTGCCCC GATCGACACG TTCCAAGACA TGCGCTCGGA AATGTGCCTG
ATCCTGGAAT CGCTGGGTAT TCCCGTTGAA GTGCACCACC ACGAAGTGGC AGGCCAAGGC
CAGAACGAAA TCGGCACGAA GTTCAGCACG CTGGTGCAAC GCGCCGACTG GACCCAGCTG
CAAAAGTACG TGATCCAGAA CGTCGCGCAC ACCTATGGCA AGACGGCGAC GTTCATGCCG
AAGCCGGTCG TGGGCGACAA CGGTTCGGGC ATGCACGTTC ACCAGTCGGT GTGGAAGGAC
GGCCAGAACC TGTTCGCAGG CAACGGCTAC GCTGGTCTGT CGGAGTTCGC GCTGTACTAC
ATCGGCGGCA TCATCAAGCA CGCCCGCGCG CTGAATGCCC TCACCAACCC GGGTACGAAC
TCGTACAAGC GTCTGGTGCC GGGCTTCGAG GCTCCGGTCA AGCTGGCTTA CTCGGCACGT
AACCGTTCGG CCTCGATCCG CATTCCGTAC GTTGCGAACC CGAAGGGCCG TCGTATCGAG
ACCCGCTTCC CGGATCCGCT GATGAACCCG TACCTGGGCT TCTCGGCGCT GCTGATGGCC
GGTCTGGATG GCGTGCAGAA CAAGATCCAC CCGGGCGAAG CTGCCGACAA GAACCTGTAC
GACCTGCCGC CGGAAGAAGA CGCAAAGATC CCGACCGTGT GCTCGAGCCT GGATCAGGCC
CTCGAGTACC TGGACAAGGA CCGCGAATTC CTGACCCGCG GTGGGGTGTT CTCCAACGCC
ATGCTCGACG CCTACATCGA GCTGAAGATG GAAGAAGTCA CGCGCTTCCG CATGACGACG
CACCCGCTCG AGTTCGAGAT GTACTACTCG CTGTAA
 
Protein sequence
MSQSIADVMK LVKENDVKFV DFRFTDTKGK EQHVSVPVSH FDEDKFESGH AFDGSSIAGW 
KGIEASDMLL VPDANTAHID PFYEEPTLVL TCDVVEPSDG KGYDRDPRSI AKRAEAYLKS
TGLGDTAYFG PEPEFFIFDG VTWNIDMQGC FVKINSEEAP WSSGKEFEHG NSGHRPGKKG
GYFPVAPIDT FQDMRSEMCL ILESLGIPVE VHHHEVAGQG QNEIGTKFST LVQRADWTQL
QKYVIQNVAH TYGKTATFMP KPVVGDNGSG MHVHQSVWKD GQNLFAGNGY AGLSEFALYY
IGGIIKHARA LNALTNPGTN SYKRLVPGFE APVKLAYSAR NRSASIRIPY VANPKGRRIE
TRFPDPLMNP YLGFSALLMA GLDGVQNKIH PGEAADKNLY DLPPEEDAKI PTVCSSLDQA
LEYLDKDREF LTRGGVFSNA MLDAYIELKM EEVTRFRMTT HPLEFEMYYS L