Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1172 |
Symbol | |
ID | 8018816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1242884 |
End bp | 1243879 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829954 |
Product | cytochrome d1 heme region |
Protein accession | YP_002981136 |
Protein GI | 241662776 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.912749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCT CGCGCGCCTC GTTTGCCCCC CGTTGGTTCT CCACGCTGGT CCTGTCGGCC GCTGCACTCC TGGCAGCGCA TGCGGCGCGT GCCGAAGTCG TCACCGTGCT CAATTCGGGC GACGCAAGCG TCTCTTTGAT CGACAAGGAC ACCCGCAAGG TGCTCGAGAC GTTCCCGATC GGCAAAGAGC CGCATCACCT GATCGCCACG CCCGACGAAA AGTCGTTGAT CGTCGCGAAC GCCGTCGGCA ACGATCTGGT GTTCCTCGAC CCTGTCACGG GCAAGATCCA GCAGCGCGTG CCGCACATTG ACGATCCGTA TCAGATTGGC TTTTCGCCTG ACCAGAAGTG GTTTCTGACC ACGGGCAACC GTCTAGACCG CATCGATATT TATCGCTGGG ACGGCCACGC CCTGACCATC GCCAAACAGA TTCCGGCGGC CAAGACGCCC AGCCACATTG CGTTTACCGC CGACAGCAAG ATCGCGTTCG TCACCGTGCA GGATTCCAAC GAGGTGATGG CCATCGACCT GCCCACGCAG AACGTGATGT GGCGCATGAC GATTGGTTCC GCGCCGGCCG GCGTGTGGGT GACGACTGAC CAGAAATACC TGTTGGTGGG CATGACCGGC GCCGATTACG TCGAAGTGAT CGACTGGCAC ACCCGCACCA GCGTCAAGCG CATCCCGACC GGCAAGGGCG CGCACAACTT CCGTGCGCTG GGCGACAAGC GCCACCTGTT CCTGTCGAAC CGCGTGTCGG GCACGATCAG CATCATCGAT CAGCAAACGC TGACCAAGGT GGGCGACATC ACCGGCCTCC CGCCTGGCCC TGACGATATG GAATTGACCG CCGACGGCAA GCAGCTGTGG GTGACCTGCC GCTGGGCCAA GCGCGTGGCG ATTGTCGACG TGGCAAGCCG CAAGGTGGTG GAAGAGATCA AGGTTGGGCG CTCGCCGCAC GGTATTTACT TCCGCACGCG CGCTCCGCTG ATTTGA
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Protein sequence | MSSSRASFAP RWFSTLVLSA AALLAAHAAR AEVVTVLNSG DASVSLIDKD TRKVLETFPI GKEPHHLIAT PDEKSLIVAN AVGNDLVFLD PVTGKIQQRV PHIDDPYQIG FSPDQKWFLT TGNRLDRIDI YRWDGHALTI AKQIPAAKTP SHIAFTADSK IAFVTVQDSN EVMAIDLPTQ NVMWRMTIGS APAGVWVTTD QKYLLVGMTG ADYVEVIDWH TRTSVKRIPT GKGAHNFRAL GDKRHLFLSN RVSGTISIID QQTLTKVGDI TGLPPGPDDM ELTADGKQLW VTCRWAKRVA IVDVASRKVV EEIKVGRSPH GIYFRTRAPL I
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