Gene Rpic12D_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1167 
Symbol 
ID8018811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1234976 
End bp1235935 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content62% 
IMG OID644829949 
Producttransaldolase B 
Protein accessionYP_002981131 
Protein GI241662771 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0516908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAGC TCGATCAACT CAAGCAGTTC ACCACCGTCG TCGCCGACAC GGGCGATTTC 
CAGGCCATGC GGGCCTACGC GCCGCACGAT GCGACGACCA ATCCGTCGCT GATCCTCAAG
GCCGTGCAGA AAGCCGAATA CCGCCCGCTG CTGGAGCAAG CCGTGCGTGA CGCCCGCAGC
GATAGCGTGG AAGACATCAT CGATGCCGTG CTCGTGGCAT TCGGCTGCGA GATCCTGTCG
ATCATCCCGG GCCGCGTGTC GACTGAAGTC GATGCACGGC TGTCGTTCGA CACCGAGGCG
ACGGTCGCCA AGGCCAAACA TCTGATTGCG TTGTACGAAG CGCGGGGCGT GGCGCGCGAG
CGCGTGCTGA TCAAGATTGC GTCGACCTGG GAAGGCATCC GCGCGGCGGA TCAGCTCCGT
GCAGAAGGCA TCCGCTGCAA CATGACGCTG CTGTTCTCGC TGGCTCAAGC GGTGGCGTGC
GCGGAAGCGG GCGTGCAGCT CATCTCACCC TTCGTCGGCC GCATCTACGA TTGGTACAAA
AAGGATGCCG GCGCCAACTG GGACCCGGTC GCGCAAGGCG GCGCGAACGA TCCCGGCGTG
CAGTCCGTCC TGCGCATCTA CAACTACTAT AAGAAGTTCG ATTACCCGAC CGAAGTGATG
GGCGCGAGCT TCCGCAACAT CTCGCAGATC GTCGAACTGG CCGGCTGCGA CCTCTTGACC
ATCAGTCCCG ATCTGCTCGC TCAGTTGCAA CAGTCCGACG CACCCGTCGA ACGCAAGCTT
TCTCCTGACA ACGCCAATGC GGCCAACATC GTGCGTCTAC CGGCGGACGA GAAGTCGTTC
CGCTGGCACA TGAACGCCGA TGCCATGGCT ACCGAAAAGC TGGCCGAAGG CATCCGCCTC
TTTGCAGCGG ACGCGGTCAA ATTGGAGGCA TTGATTGAGC CGCTGCGCGT GGCGGCGTAA
 
Protein sequence
MTQLDQLKQF TTVVADTGDF QAMRAYAPHD ATTNPSLILK AVQKAEYRPL LEQAVRDARS 
DSVEDIIDAV LVAFGCEILS IIPGRVSTEV DARLSFDTEA TVAKAKHLIA LYEARGVARE
RVLIKIASTW EGIRAADQLR AEGIRCNMTL LFSLAQAVAC AEAGVQLISP FVGRIYDWYK
KDAGANWDPV AQGGANDPGV QSVLRIYNYY KKFDYPTEVM GASFRNISQI VELAGCDLLT
ISPDLLAQLQ QSDAPVERKL SPDNANAANI VRLPADEKSF RWHMNADAMA TEKLAEGIRL
FAADAVKLEA LIEPLRVAA