| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1126 |
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| Symbol | |
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| ID | 8018768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1188354 |
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| End bp | 1191875 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829907 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002981090 |
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| Protein GI | 241662730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.443367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC ACGCTTACGA ACGCGACGGT GCTGCCGTCT CGCCCGAGGC CTTCTCGCGC
GCTGCGTGCG ACCCGCAGCG CTCCGTCGTG GTGGAAGCGT GCGCGGGCAG CGGCAAGACG
TGGCTGCTGG TCACGCGCAT GCTGCGTTTG CTGCTGGCCG GTGCCGCGCC GTCGGACATT
CTCGCCATCA CGTTTACGCG CAAGGCCGCC GAAGAGATGC GCCAGCGCTT GCTCGACATC
CTCGCCCAAC TGGCCGGCGC CGACGATGAG GGGGTCGTTC GCGAGCTGAT CGCGCGTACG
GTGGACGAGC GCGATGCGCC GGCGCTGATT GAAACGGCGC GTGGGCTGTA TGCGCGCGTG
CTGGAATCGC CATCGCGCAT GGCGATTGAT ACGTTCCATG GCTGGTTTGG GTCGTTGCTG
CGCGGGGCGC CGCTGTCGTC TGGCGTCCAG CAGGGCGCCT CGCTGCGTGA AGATGCCGGG
CGGCTGCGGC GCGAAGCCTG GGCGCCTTTC TGGCGCGGCT TGCTCGCCGA AGATCACGCT
GACTTGCGCG CCGCGTATGA GTCGCTTGCC GATCTGGTCG GCGATTTCCA GGCCGGACGC
CTGCTCGATG CAATGTTCCA CCAGCGCAGC GACTGGTGGG CGTACAAGAC GCAGGCCGGC
GGGCGTCCGC TGGATGCGTT GGACGAATTG CTTGGCGACG ATGCGACCGT CGATCCTCTG
ATCGAAGCGC TGCAGGATGC GGCATTGCTG GCCGACATGC TGCGCGTGTC CGGCTTGCTT
GGGCAGGGCG CTGCTGCCGA AGGCAAGCGC GCGGTGGCCA TCGAATCGGC GGTCACTGCT
GCGCGCGGCA TGGATGTGTC GGACGAGGCT GCTCGCGCGC AAGCGTTTGA GGCGCTGTTC
GCCGCGTTCC ACACGCAGGC CGGCAAAGCA CGCGCCTGCA AGCCGACCAA GGCGCTCATC
AAAGCCATCG GCGACGAGCA CGCGCAAACG CTGGTGACCT TGCATACCAC GCTTTGCGAA
ACTCTGACGG CGTTTCAGGC GCGTCGCCAG GAGGCCCGCG TGCGCGCCGT CAACGCTGCA
TTGTTTGCGC TGGGCGATGC ACTCATCGAC CGCTATCAGG CGTACAAGCG CCAGGCGCGC
GCGATGGATT TCACCGATCT CGAATGGGAA GCGGCGCGCT TGATGCAGCA AGACGATACG
GCCGCTTACC TGCAGGTGCG GCTCGACGCG CGCTACAAGC ATCTGCTGCT GGATGAGTTT
CAGGATACGA ATCCGATGCA GTGGCGCATC CTGCAAGGCT GGCTGGCCGG CTATGCCGGC
ACCGGCACGC AGCCAAGCGT GTTCCTCGTG GGCGATCCGA AGCAATCGAT CTACCGGTTC
CGGCGCGCCG ATGCCCGGCT GTTCGACGCT GCGCGCGAAA TGCTGGTTGC AGAATTCAAT
GCGACCGTGC TGCGTACCAA TCGCACGCGT CGCAACGCGC CGGCCGTACT GGAGTGGGTC
AATGCCGTGT TCCTGCAAGC GCGGGCGCGC GGCGACTATC CGATCTACGC CGAGCAAAGC
ACCGCCGTGG ACGCACCCAC GGGGCAGGCG CTGCTTTTGC CGCTGGTGCC GGTGTCCGAA
GCCGAGCAGG CTGACGAAGC CGCGCCTCGC GATACCCTCA CCGAACCGCG CGAAGAAGCC
GGCGATTCGC AGCGCTATGC CGAGGGCCGC CAAGTGGCGG CTTGCCTGCG CGCATTGCAC
GCCAATGAGC GCATTCGCGA AGGCGGCGTC GAGCGCGCCG TGCGGTGGAG CGATTTCCAA
CTGCTTGTCC GCCGCAAACG CTATCTCGCC GATTACGAAC GTGCGCTGCG CGATGCCGGC
GTGCCGTATC TGAGCCCGCG CCGCGGCGGC CTGCTGGCTA CGCTTGAAGC GCTTGATCTA
TGCGCGCTGC TCGATTTCCT GATGACGCCG CAGGCGGATT TGTCGCTTGC GCATGTGCTG
CGCAGCCCCG TTTTCGCAGC CTCGGACGAG CACCTCATCG CACTGGCGCA GTTTGGCGAG
GGCGCGGCCG CATTGACATG GTGGGAGCGC CTGACCGCGC TGGCCGGCCA CGCGGATGGG
TCGGACACCT TGCGCTACGC GCATCGCATG CTGTCGCGCT GGCTGGCGGT GGCGCCCACG
CTGCCCGTGC ACGATCTGCT CGATTACATC GTCTACACCG GCGAACTCAA GCGCCGCTAT
GCCGAGCGCG CACCGGCCGC GATCCGCGAT CAGGTGCTCG CCAACCTGGA TGCGTTCTTG
AAGCTCGCGC TCGATCTGGA CGGTGGCCGG TATCCGAGCC TGCCGAAGTT CATGGCGGAG
CTGCGCGCCA TCCGCCAGGG CGACGAGGAC GAAAGCCCCG ACGAAGGCAT GCAGGGCGAC
ACAGAGGCGC CGGATACTAT TGATGCCGAA GTCGCCAGCG AGGGTCTTGA TGCCGTGCAG
ATCCTGACCG TGCATGCCTC CAAGGGGCTG GAAGCGCCGT TCGTCGTGCT GCTCGACAGC
CACCACAGCG ACGCGCGCGT CGATACGGCT GGGATCCTGA TCGACTGGCC GCCCGGAGCG
CAGGCGCCAG CGCATTTTTC CGCCTTCGGC AAGACGTCCG AGCGTGGCCT CGCGCGCGAG
CTTCTCTTCA AGCAAGAAAA TGCGCTTGCC GAGCGCGAAA ACTGGAACCT GCTCTACGTG
GCGATGACGC GTGCGCGGCA AGCACTGATC GTTTCCGGCG TGGCGAACAA GCGCGATGCC
ACGGCAGCCC AATCTCTGGA TGAAGGCGAT GCGCCCGAGG TGGACGGCAC GGCCAGCTGG
TACACACTGC TGGCCTCGGC AGGAGTGGCG TCACCCGCTG CAATGCTGGA TGACGTAGCC
GACTCGGTCT CGAGTGCAGC GGGGCACGAG GTTGTCTCGT ATCACGATTT TCGCGCCCCG
CTGACTGTAA CGGTGCGTGT GGGGGCGGCC GGCGCGCCTG CCGAAGGCGC GGCCGATATC
GTCTTCGACC AAGGCGCCGT CGCTCAGGGC GAATTGCTGC ATGCGGTGCT CGAGCGCCTG
ACACGCCGGG GCTTGCCGAA ACAAGCGCCC GACGCCGAGA CGATCGCGCG CTGGTTCGGC
GCGACCGGCG TCACGCAAGC CGATGCCACA CGCGCCGCTG ACGCTGTGCG CCGGATGCTC
TCTGCCGAGG CGCTGGTGCA TGTCTTCGAC CCTGCGCGCT TCGACGCCGC TCATAACGAG
ATCGAACTTT TCGGTCGCGA CGGTGCGCTG TTGCGCATCG ATCGTCTGAT CGAGCGTGGC
AACGAGGTCC TCGTGGTCGA CTACAAGCTG CGCTTGCTGC CGGTCGAACG AGCCGCCTAT
GCCGATCAGC TGCGCGGCTA TGTGGCTGCC GTCACGCCGA TGTATCCGGG GCGCGCCGTG
CGCGCGGGCG TGGCGACTGC GCAGGGGGAA TGGATCGATC TGGATGCATT GCCCAAGTCG
GTGCAGGCGT CACACGACGA CAGCCAGGGC GCGCTGTTCT GA
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| Protein sequence | MSDHAYERDG AAVSPEAFSR AACDPQRSVV VEACAGSGKT WLLVTRMLRL LLAGAAPSDI
LAITFTRKAA EEMRQRLLDI LAQLAGADDE GVVRELIART VDERDAPALI ETARGLYARV
LESPSRMAID TFHGWFGSLL RGAPLSSGVQ QGASLREDAG RLRREAWAPF WRGLLAEDHA
DLRAAYESLA DLVGDFQAGR LLDAMFHQRS DWWAYKTQAG GRPLDALDEL LGDDATVDPL
IEALQDAALL ADMLRVSGLL GQGAAAEGKR AVAIESAVTA ARGMDVSDEA ARAQAFEALF
AAFHTQAGKA RACKPTKALI KAIGDEHAQT LVTLHTTLCE TLTAFQARRQ EARVRAVNAA
LFALGDALID RYQAYKRQAR AMDFTDLEWE AARLMQQDDT AAYLQVRLDA RYKHLLLDEF
QDTNPMQWRI LQGWLAGYAG TGTQPSVFLV GDPKQSIYRF RRADARLFDA AREMLVAEFN
ATVLRTNRTR RNAPAVLEWV NAVFLQARAR GDYPIYAEQS TAVDAPTGQA LLLPLVPVSE
AEQADEAAPR DTLTEPREEA GDSQRYAEGR QVAACLRALH ANERIREGGV ERAVRWSDFQ
LLVRRKRYLA DYERALRDAG VPYLSPRRGG LLATLEALDL CALLDFLMTP QADLSLAHVL
RSPVFAASDE HLIALAQFGE GAAALTWWER LTALAGHADG SDTLRYAHRM LSRWLAVAPT
LPVHDLLDYI VYTGELKRRY AERAPAAIRD QVLANLDAFL KLALDLDGGR YPSLPKFMAE
LRAIRQGDED ESPDEGMQGD TEAPDTIDAE VASEGLDAVQ ILTVHASKGL EAPFVVLLDS
HHSDARVDTA GILIDWPPGA QAPAHFSAFG KTSERGLARE LLFKQENALA ERENWNLLYV
AMTRARQALI VSGVANKRDA TAAQSLDEGD APEVDGTASW YTLLASAGVA SPAAMLDDVA
DSVSSAAGHE VVSYHDFRAP LTVTVRVGAA GAPAEGAADI VFDQGAVAQG ELLHAVLERL
TRRGLPKQAP DAETIARWFG ATGVTQADAT RAADAVRRML SAEALVHVFD PARFDAAHNE
IELFGRDGAL LRIDRLIERG NEVLVVDYKL RLLPVERAAY ADQLRGYVAA VTPMYPGRAV
RAGVATAQGE WIDLDALPKS VQASHDDSQG ALF
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