Gene Rpic12D_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1124 
Symbol 
ID8018766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1184970 
End bp1185296 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content57% 
IMG OID644829905 
Productthioredoxin 
Protein accessionYP_002981088 
Protein GI241662728 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0722597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.17575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC AGATCAAGTA TGTGAGCGAC GCGTCCTTCG AGGCAGACGT GCTCAAGTCC 
GACAAACCCG TGCTGGTCGA TTTCTGGGCC GAATGGTGCG GTCCTTGCAA AATGATCGCC
CCGATCCTGG ACGAAGTTTC CAAGGACTAC GGCGAGAAGG TGCAAATCGC CAAGATCAAC
GTCGATGAGA ACCAGGGCGT GCCGGCCAAG TTCGGTATTC GCGGCATCCC GACGCTGATT
CTGTTCAAGA ATGGCGCTGT GGCCGCCCAG AAGGTCGGCG CGCTGTCCAA GTCGCAACTG
ACTGCATTCC TGGACAGCCA CCTGTAA
 
Protein sequence
MSEQIKYVSD ASFEADVLKS DKPVLVDFWA EWCGPCKMIA PILDEVSKDY GEKVQIAKIN 
VDENQGVPAK FGIRGIPTLI LFKNGAVAAQ KVGALSKSQL TAFLDSHL