| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1119 |
|---|
| Symbol | |
|---|
| ID | 8018761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1179201 |
|---|
| End bp | 1180067 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644829900 |
|---|
| Product | protein of unknown function DUF980 |
|---|
| Protein accession | YP_002981083 |
|---|
| Protein GI | 241662723 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.598803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.193609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCGT CCGTTTTCCG CTGGCTCTCA CGCCGCGCAC GTACGCGGCG CCTGGCGCGT
TACGCCATCT CCGACGCGCT GTGGTCACGC GCGCTCGAGA GCCTGCCCTT TCTGCTCGAC
TGGTCCGACG CAGACCTCGC ACGCCTGCGT GAAACGGCCA CGCTCTTCAT CGCCGAAAAG
GAATTCACCA CCGCGCACGA TTTGCCGCTC ACCGACGACA TGGTGGTCAG CATTGCCGCG
CAAGCCAGCG TGCCGATCCT GGAGCTGGGC ATCACGTGGT ACAGCGGATG GCACGGCGTC
GTCATCTACC CTGGCGAGTT CGTCATCCGC AAGGAAGTCA TGGATGAAGA CGGCGTCGTG
CACAACGTGC GCGAAGAAGC CGTCGGTGAG GCATGGGAGC ACGGTCCGGT CATCCTCTCG
TGGCAGGACA TCGAACTCGG GGGCGCACTG GCCGCGCCCG GTGCGCAGCC GTATAACTTG
GTGGTGCATG AGTTCGCGCA TAAGCTCGAC ATGCTCAACG GCGAGTCGGA CGGCATCCCG
GCGTTTTCAT CACGCCTGCA TGCCAACGTT GATCGCGAGC AATGGGCCGA TGACCTCAAT
GCCGAGTACG ACGTGTTCGT CAATCGTTGT GAGCAGATTC CGGAGCGCCG TTGGGGCGAC
GACCCGATCC TGTCGGTGCT CGACCCTTAT GGCGCCCACC ATCCGGCCGA GTTCTTTGCG
GTGGCTTCGG AAGTGTTTTT CGTCGAACCG GTGGCCTTGC TTGAGGCGCT GCCATCGTTG
TATGCGCTCC TGCAGGCGTT TTACCTGCAG GATCCGGCAC GGCGCGTGCT GGGCTCCGAG
CAACGCCAGG AGGGATCCCT GCCATGA
|
|---|
| Protein sequence | MLSSVFRWLS RRARTRRLAR YAISDALWSR ALESLPFLLD WSDADLARLR ETATLFIAEK
EFTTAHDLPL TDDMVVSIAA QASVPILELG ITWYSGWHGV VIYPGEFVIR KEVMDEDGVV
HNVREEAVGE AWEHGPVILS WQDIELGGAL AAPGAQPYNL VVHEFAHKLD MLNGESDGIP
AFSSRLHANV DREQWADDLN AEYDVFVNRC EQIPERRWGD DPILSVLDPY GAHHPAEFFA
VASEVFFVEP VALLEALPSL YALLQAFYLQ DPARRVLGSE QRQEGSLP
|
|---|
| |