| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1112 |
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| Symbol | |
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| ID | 8018751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1170931 |
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| End bp | 1171578 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644829890 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_002981076 |
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| Protein GI | 241662716 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.110191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.893499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCATT TCGTACTTCA TTCCATGGCG CGCCTGGCGG TAGGTGTTGT GATCGGTTGC
GGCGTGCTCG TGTCGAATGC GGTGCATGCT GATACGGTCT TCAAGGACAC GGAAGTCCGC
GCCGACGTCA AGCCCGAAGC CAAGTCCGGC CTCATTTCCA ACGTAATGAG CAAGACCGGC
GACGTGGTCA TGAACGCACT GGGCATGATC GGCCTGCGTT ACCGTTTCGG GGGCAATACG
CCGGAATCGG GCCTCGATTG CAGCGGTTTC GTCCGCTACG TCTTCAATGA CACCTTCGGT
TTCCTGCTGC CGCGCCGCGC CGTGGAAATG AGCCGCGTCG GCACCAGCGT CGACACGGCT
GAACTGCGTC CTGGCGACTT GGTGTTCTTC AACACCATGC GCCACACGTT CTCGCACGTC
GGCATCTATA TCGGCGACAA CAAGTTCGTG CACGCACCGT CCACGGGCAG CAAGATTCGC
GTGGACGACA TGACCGCCTC GTACTGGGTG ACGCGCTACA ACGGCGCCCG CCGCATCGAG
GGCAATTCCG GTACCGCAAT CAAGGACGGC GCCGATAACT TTGTCGAACA GCTCAAGCGC
GTTGACCCGA ACGCCGCTGG CAAACCGCTG GCAATGTACG GTGGTTGA
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| Protein sequence | MQHFVLHSMA RLAVGVVIGC GVLVSNAVHA DTVFKDTEVR ADVKPEAKSG LISNVMSKTG
DVVMNALGMI GLRYRFGGNT PESGLDCSGF VRYVFNDTFG FLLPRRAVEM SRVGTSVDTA
ELRPGDLVFF NTMRHTFSHV GIYIGDNKFV HAPSTGSKIR VDDMTASYWV TRYNGARRIE
GNSGTAIKDG ADNFVEQLKR VDPNAAGKPL AMYGG
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