Gene Rpic12D_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1099 
Symbol 
ID8018737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1155284 
End bp1155790 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID644829876 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_002981063 
Protein GI241662703 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.448162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG TCAAGCTGCA CACGAACCAC GGCGACATCA CCCTGGCCCT GGACGCTGAG 
AAGGCACCCA AGTCGGTTGC CAATTTCGTC GCCTATGTGA AGGATGGCCA CTACAACGGC
ACGGTGTTCC ACCGCGTCAT CAAGGGCTTC ATGATTCAGG GCGGCGGCTT CGAGCCAGGG
GAGAAGATGA ACCAGAAGCC CACCAAGGCA CCGATCGACA ACGAAGCCAA CAACGGCCTG
AAGAACGAAC GCGGCGCGAT TGCCATGGCG CGTACCAACG ATCCGCACTC GGCCACCGCG
CAATTCTTCA TCAACACGGT CGACAACGAC TTCCTGAACC ACACGTCGCC GACGCCGCAA
GGCTGGGGCT ACGCCGTGTT CGGCAAGGTG ACCGAAGGCA TGGATGTGGT CGACAAGATC
CGCTCGGTGC GCACGGGCAA CCGCGGCTTC CACCAAGACG TGCCGTTGGA AGACGTGATC
ATCGAAAGCG CTGAAGTGAT CGAATGA
 
Protein sequence
MTQVKLHTNH GDITLALDAE KAPKSVANFV AYVKDGHYNG TVFHRVIKGF MIQGGGFEPG 
EKMNQKPTKA PIDNEANNGL KNERGAIAMA RTNDPHSATA QFFINTVDND FLNHTSPTPQ
GWGYAVFGKV TEGMDVVDKI RSVRTGNRGF HQDVPLEDVI IESAEVIE