Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1077 |
Symbol | |
ID | 8018715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1130533 |
End bp | 1131612 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644829854 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_002981041 |
Protein GI | 241662681 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0552397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCCG CCACCACACT CGTCGCCAAT TCCCCCCAGC CCGTGGAGCA AAGAATCGAC GTGCTCGTCG TGGGCGCCGG GCCAGTCGGC CTGTTTGCGG CGTTCCAGGC AGGCGTGCTC GGCTTGTCTT GCGTGCTGGT GGATGCCTTG GACCGCCCGG GCGGCCAATG CACGGAGCTG TACCCGGAAA AGCCGATCTA TGACATCCCG GCGCTGGTCT CGTGCACGGC GCAGGAACTC GTCGACCGGC TGATGGCCCA GTGCGCGCCG TTCAACTACC CCATCCTGTG TGGTCGCAGG GCCGAAACCG TGGAAACACT GGAAAGCGAG CACGGCCGGC GCTTTCGGGT CACCACCAGC GCCGGCGACG TCTTTGACTG CGCCGCCGTA CTCATTACGG CAGGCAACGG TGCGTTCACC CCACAACGTG TGGCTTTGCC TGAAGCGGCC GCTCTGGAAG GTCGCCATCT GCACTATGCC GTGCGCGACA CCGCGCGCTT TGCGGGCAAG CGCGTCGTCA TCGCCGGCGG CGGGGATTCC GCGCTCGACT GGGCGCTCGC GCTGCGCAAA GTCGCCGCAC GCGTGACACT GGTCCATCGG CGAGAGGGCT TCCGTGCAGC CGATGCGAGC GTCGCTGAAA TGCGCGCCGC CGTCGCCGCC GGCGAAATGG ATTTCGTGCT CGGCATGCTT TCGCGCCTGG ACAGCACGCC CGACGGGACG CTCACCGGCG CAGCCATCCG CGGGCGCGAC GGCGAAACCG TTCTGCCCTG CGATGAACTG ATCGCCCTGT ATGGTCTGGT TTCCGAGCCG GGCCCGATTG TCAACTGGGG CGTGGAGATG CGCGCGGGCC GCATCACGGT GGAAACAACG GCGTACGAGA CCTCGCGCCC CGGCGTGTTT GCGGCCGGCG ATATCGCGCT GTATCCAAAC AAGCAGAAAC TGATTCTGTC GGGCTTTCAT GAAGTGGCGA TGGCGCTTCG GCGCGCCTAT CGGTATGCGA ATCCGGACAA GACGCTGGTG CATACGCATT CGAGCAACGA CGCCGGGCTG CAGACGAAAC TGCATGTAAC GGCGGAATAA
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Protein sequence | MTSATTLVAN SPQPVEQRID VLVVGAGPVG LFAAFQAGVL GLSCVLVDAL DRPGGQCTEL YPEKPIYDIP ALVSCTAQEL VDRLMAQCAP FNYPILCGRR AETVETLESE HGRRFRVTTS AGDVFDCAAV LITAGNGAFT PQRVALPEAA ALEGRHLHYA VRDTARFAGK RVVIAGGGDS ALDWALALRK VAARVTLVHR REGFRAADAS VAEMRAAVAA GEMDFVLGML SRLDSTPDGT LTGAAIRGRD GETVLPCDEL IALYGLVSEP GPIVNWGVEM RAGRITVETT AYETSRPGVF AAGDIALYPN KQKLILSGFH EVAMALRRAY RYANPDKTLV HTHSSNDAGL QTKLHVTAE
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