Gene Rpic12D_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1077 
Symbol 
ID8018715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1130533 
End bp1131612 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID644829854 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002981041 
Protein GI241662681 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0552397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG CCACCACACT CGTCGCCAAT TCCCCCCAGC CCGTGGAGCA AAGAATCGAC 
GTGCTCGTCG TGGGCGCCGG GCCAGTCGGC CTGTTTGCGG CGTTCCAGGC AGGCGTGCTC
GGCTTGTCTT GCGTGCTGGT GGATGCCTTG GACCGCCCGG GCGGCCAATG CACGGAGCTG
TACCCGGAAA AGCCGATCTA TGACATCCCG GCGCTGGTCT CGTGCACGGC GCAGGAACTC
GTCGACCGGC TGATGGCCCA GTGCGCGCCG TTCAACTACC CCATCCTGTG TGGTCGCAGG
GCCGAAACCG TGGAAACACT GGAAAGCGAG CACGGCCGGC GCTTTCGGGT CACCACCAGC
GCCGGCGACG TCTTTGACTG CGCCGCCGTA CTCATTACGG CAGGCAACGG TGCGTTCACC
CCACAACGTG TGGCTTTGCC TGAAGCGGCC GCTCTGGAAG GTCGCCATCT GCACTATGCC
GTGCGCGACA CCGCGCGCTT TGCGGGCAAG CGCGTCGTCA TCGCCGGCGG CGGGGATTCC
GCGCTCGACT GGGCGCTCGC GCTGCGCAAA GTCGCCGCAC GCGTGACACT GGTCCATCGG
CGAGAGGGCT TCCGTGCAGC CGATGCGAGC GTCGCTGAAA TGCGCGCCGC CGTCGCCGCC
GGCGAAATGG ATTTCGTGCT CGGCATGCTT TCGCGCCTGG ACAGCACGCC CGACGGGACG
CTCACCGGCG CAGCCATCCG CGGGCGCGAC GGCGAAACCG TTCTGCCCTG CGATGAACTG
ATCGCCCTGT ATGGTCTGGT TTCCGAGCCG GGCCCGATTG TCAACTGGGG CGTGGAGATG
CGCGCGGGCC GCATCACGGT GGAAACAACG GCGTACGAGA CCTCGCGCCC CGGCGTGTTT
GCGGCCGGCG ATATCGCGCT GTATCCAAAC AAGCAGAAAC TGATTCTGTC GGGCTTTCAT
GAAGTGGCGA TGGCGCTTCG GCGCGCCTAT CGGTATGCGA ATCCGGACAA GACGCTGGTG
CATACGCATT CGAGCAACGA CGCCGGGCTG CAGACGAAAC TGCATGTAAC GGCGGAATAA
 
Protein sequence
MTSATTLVAN SPQPVEQRID VLVVGAGPVG LFAAFQAGVL GLSCVLVDAL DRPGGQCTEL 
YPEKPIYDIP ALVSCTAQEL VDRLMAQCAP FNYPILCGRR AETVETLESE HGRRFRVTTS
AGDVFDCAAV LITAGNGAFT PQRVALPEAA ALEGRHLHYA VRDTARFAGK RVVIAGGGDS
ALDWALALRK VAARVTLVHR REGFRAADAS VAEMRAAVAA GEMDFVLGML SRLDSTPDGT
LTGAAIRGRD GETVLPCDEL IALYGLVSEP GPIVNWGVEM RAGRITVETT AYETSRPGVF
AAGDIALYPN KQKLILSGFH EVAMALRRAY RYANPDKTLV HTHSSNDAGL QTKLHVTAE