| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1054 |
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| Symbol | |
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| ID | 8018692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1107142 |
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| End bp | 1108836 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829831 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002981018 |
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| Protein GI | 241662658 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0497812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.288787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA TCGCTGTCCG TTCGCATTCT GCTGACGCCG CCACCACGCT GGCCGGCCAC
GGCATCCACC CTGTCCTGGC GCGCATCCTC GCCGCCCGGG GCGTCGCCCG GCCCGACGAA
CTGTCGACCG AGCTGACCGA CCTCCTGCCC CCGGCGCAAC TCAAGGGCAT TGACGACGCT
GCACGCTACC TCGCCGATGC CATCGCCGCC AAGAAGCGGC TGCTGATCAT CGCCGACTAC
GACTGCGACG GCGCCACCGC CTGTGCCGTG GGCGTGCGCG GCCTACGCAT GCTGGGCGCG
CAGGTCAGCT ACATCGTCCC GAACCGCTTC GAGTACGGCT ACGGCCTGTC GCCCGAAATC
GTCGCACTGG CCGCACGCGA GAAGCCGGAC GTGCTGGTCA CCGTCGACAA CGGCATCGCC
GACGTGGCGG GCGTGGCGGC CGCCAACGCG CTGGGTATCG ACGTGGTCGT GACGGACCAC
CACATGCCCG GCGCGCAATT GCCCGAGGCA CGCGTGATCG TCAATCCGAA CCAGCCGGGC
TGCGGCTTCC CGAGCAAGAA CCTGGCGGGT GTCGGCGTGA TGTTCTACGT CCTGCTGGCC
CTGCGGGCGG AATTGCGCAA GCGCGGTGTG TTCACGCCGC AGGATCAGCC GCGCCTTGAT
GCGCTGCTCG ACCTGGTGGC ACTCGGCACC GTGGCCGACG TGGTCAAGCT CGACGCCAAC
AACCGCCTGC TGGTCGCGCA GGGCCTCAAG CGCATGCGCG CCGGCCGGAT GTGCCCGGGC
ATCGCCGCGT TGTTCCGCGT GGCTGGCCGC GAGGCACGTC GCGCGTCGAC GTTCGATCTG
GGCTTCGGAC TCGGCCCGCG CCTGAATGCT GCAGGGCGGC TGGCCGACAT GTCGCTCGGC
ATCGAATGCC TGCTCACCGA CGACTACGAC CGCGCCATGT CCATCGCCGC CGAACTTGAC
GGCATGAACC GCGAGCGCCG CGAGATCGAA GCCGGCATGC AGCAGGAAGC GCTCGCCATC
CTCGACAGCA TGAACACCAT CGATGGCGCC GGTCGCCACA CCATCGCGGT CTACAACGAG
ACATGGCACC AGGGCGTGAT CGGCATCGTC GCGTCGCGCA TCAAGGACAA GTTCCACCGC
CCGGTGTTCA CCTTCGCGCC CGGCGACGAC GGCGTCATCA AGGGGTCGGG CCGTTCGATT
CCAGGCTTCC ACCTGCGCGA TGCGCTGGAC GCGGTTCACA AGCGCAGCCC AGGGCTGATC
GTGAAATTCG GTGGCCATGC CATGGCGGCA GGGCTCACGC TGCGCGAAGA CGGTTTCGAG
ACATTCGTCG CCACCTTCGA AGCCGTCGGC CGGGAATGGC TGACCGAGGC CCTGCTCTCG
CGCGTGCTCG AAACCGACGG CGAAGCGGAC CCGGAATGCT TCACGCCGCA GTTCGTCGAG
CTGCTCGAAA CCCAGGTCTG GGGCCAAGGC TTTCCGGCGC CAAGCTTCTG CGGCGAGTTC
GACGTGCTAT CGCAGGCGGT GCTGAAAGAC AAGCACCTGA AGCTCAAGCT CGGCCGCGGC
AAGCAGCATT TCGACGCGAT CTGGTTCAAC CACGCAGAGC CGCTCGGCGC CTCGGCGTAC
GTGGCCTACC GGCTCGACAA CAACACGTTC AATGGCATCA CGCGCGTGCA GATGGTGATC
GAGCACGCGC AATAG
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| Protein sequence | MTRIAVRSHS ADAATTLAGH GIHPVLARIL AARGVARPDE LSTELTDLLP PAQLKGIDDA
ARYLADAIAA KKRLLIIADY DCDGATACAV GVRGLRMLGA QVSYIVPNRF EYGYGLSPEI
VALAAREKPD VLVTVDNGIA DVAGVAAANA LGIDVVVTDH HMPGAQLPEA RVIVNPNQPG
CGFPSKNLAG VGVMFYVLLA LRAELRKRGV FTPQDQPRLD ALLDLVALGT VADVVKLDAN
NRLLVAQGLK RMRAGRMCPG IAALFRVAGR EARRASTFDL GFGLGPRLNA AGRLADMSLG
IECLLTDDYD RAMSIAAELD GMNRERREIE AGMQQEALAI LDSMNTIDGA GRHTIAVYNE
TWHQGVIGIV ASRIKDKFHR PVFTFAPGDD GVIKGSGRSI PGFHLRDALD AVHKRSPGLI
VKFGGHAMAA GLTLREDGFE TFVATFEAVG REWLTEALLS RVLETDGEAD PECFTPQFVE
LLETQVWGQG FPAPSFCGEF DVLSQAVLKD KHLKLKLGRG KQHFDAIWFN HAEPLGASAY
VAYRLDNNTF NGITRVQMVI EHAQ
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