Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1052 |
Symbol | |
ID | 8018688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1105504 |
End bp | 1106238 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829827 |
Product | protein of unknown function DUF899 thioredoxin family protein |
Protein accession | YP_002981016 |
Protein GI | 241662656 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000759433 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0411864 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGC ACCCCGTCGT TTCAAGAGAC GAATGGCTTA TCCAGCGCCG AGCGTTGCTG GCGCGCGAGA AAGAGGCCAT CCATCTGCGC GACGCCATCA ACGCCGAGCG CCAAGCGCTG CCGTGGGTCA AGGTCGATGC GGCATACGTG TTCGAGTCGC CGGAGGGCAA GAAGACGCTG CTCGACCTGT TCGACGGCCG CAGCCAACTG ATGGTCTATC ACTTCATGCT CGGCCCAGAC TGGGATGCGG GCTGTCCGGG GTGCTCCTTC CTGTCCGACC ATATTGGCGG AATGCTCCCG CATTTGAACC ACCACGACGT GACGTTCGTC GCGGTGTCCC GCGCGCCGAT GGACAAGATC GCCACCTACA AAAAGCGCAT GGGCTGGCGA TTCCCGTGGG TGTCGTCGTT CGGCTCGACG TTCAATCACG ACTATCGCGT GAGTTTCTCG CAGGACGAAC TCGCAAGCGG GACGGTCGAC TACAACTACA CGGCTACGCC ACGCGAAGAG GCTCACGACG AACTGCCTGG AATGAGCGCC TTTTATCAAG ACGAGGCGCG CAATGTCTTC CACACGTACT CGACGTATGC GCGCGGCTTG GAGGACATGG TTGGCACGCT GCTGCTGCTC GATCGCGCGC CGCTTGGCCG CAATGAAAAC GGCCCGATGT CATGGGTGCG CCGTCACGAC GAATATGAAG ACGCGCCGAA CACGCACGGC TGCAGCGCGA CGTAA
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Protein sequence | MQAHPVVSRD EWLIQRRALL AREKEAIHLR DAINAERQAL PWVKVDAAYV FESPEGKKTL LDLFDGRSQL MVYHFMLGPD WDAGCPGCSF LSDHIGGMLP HLNHHDVTFV AVSRAPMDKI ATYKKRMGWR FPWVSSFGST FNHDYRVSFS QDELASGTVD YNYTATPREE AHDELPGMSA FYQDEARNVF HTYSTYARGL EDMVGTLLLL DRAPLGRNEN GPMSWVRRHD EYEDAPNTHG CSAT
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