Gene Rpic12D_1033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1033 
Symbol 
ID8018668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1083131 
End bp1084507 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID644829809 
ProductAldehyde Dehydrogenase 
Protein accessionYP_002980999 
Protein GI241662639 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.611975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT ACCAGACGTT GCTCGACCGG CAACGCGAAT TTTTCCTCAC CGACGCGACT 
AAGTCTGCCG CCTGGCGCCT GGATCAGCTC GACCGCATGG AACGCCTGCT GCGTGAGAAC
CAGGAGGCGT TTTGCAATGC GCTGTACCAG GATTTCCGCA AGCCGCCTTT CGAGCAACTG
TTCGAGATCA CCGTGCCGCT GGGCGTGATC GATTATTACC GCCGGCACCT GGTCGATCTG
ATGGCACCGC AGCAGGTGGA AATCCCCCCA GGCCTAGAAG CCGAGGGCTA CCGTGGCATG
ATCTACAAGG AGCCGTATGG CCCCACGTTG GTGATCGGTC CCTTCAACGC ACCGGTGCTC
CTGCTGCTGG ACCCCGCTAT CGCTGCATTG GCAGCCGGCA ACCCGGTCAC GCTCAAGCCG
GCAAACACCA CACCGACGGT GGCAGCGTTG CTCCAGACCC TGATCCCCAA GTACTTCGCA
CCGGAGGCTG TGACCGTGGT GACGGGCGGC CGCGAGGAAA TCTCCGCCCT GCTTGAGTTG
CCCTTCGATT TCATCTTCTT TACCGGCAGC GCCGCAGTCG GCAAGGTTGT GATGCGCGCT
GCGGCGGAGC ATCTGACACC CGTGATCCTC GAGCTGGGTG GCCAGAACCC CACGGTGGTA
GATGCCACGG CCAACCTCGA CATCGCCATC GACCGCATCG CCTGGGGCCA CAACGCCATC
TCAGGTCAGT GGTGTATCGC GCCGGGTTAC GTGTACGTTC ACCACAGCAT TGCTGACGAT
TTCATCGCCC GGATCAAACG CTCGCTCACC GCCATGTATG GCGAAGACCC AAGCCGCAGC
CCCGACTTCG CCCGCATGAT CAGCGCGCAC GATGCGCAGC GCGTGGCCAA TTACATTCAG
CCCGAGAAGG TGGTGCATGG CGGTCGCTTC GATATCCCGG GCCGCTACGT CGAGCCCACA
GTGCTGTACC CCAGCAGTTG GGATGACCCG GCGATGCAGC AGGAGATTTT TGGCCCCGTG
CTGCCGGTGC TGCCCTACGA CGACCTGGAT GAGGTGATCG AGACGATCAA GCGCAAACCG
AAGTCCCTTG CGGCCTACAT CTTCAGCAAA GACCAGCGCG CAATCGATCG TTTCCTAGGC
AGCGTGTCCT TTGGTGGCGG CTGCGTGAAC CAGACCAACC TGCACTGCTG GATCGACAGC
CTCCCGTTTG GCGGCGTGGG CTTGAGCGGA ATGGGCAAGT ACTACGGCCA GGCCGGGTTC
GACGCGCTGT CCAATACCAA GTCGCTGCTG ATAGGCAACC CAGACAAGGT ACTTGATGTC
TTTCCACCCT ATGCGGGCAA GGATATTGCG ACCAGCTTGG CGCTGTTCGC CAGTTGA
 
Protein sequence
MNQYQTLLDR QREFFLTDAT KSAAWRLDQL DRMERLLREN QEAFCNALYQ DFRKPPFEQL 
FEITVPLGVI DYYRRHLVDL MAPQQVEIPP GLEAEGYRGM IYKEPYGPTL VIGPFNAPVL
LLLDPAIAAL AAGNPVTLKP ANTTPTVAAL LQTLIPKYFA PEAVTVVTGG REEISALLEL
PFDFIFFTGS AAVGKVVMRA AAEHLTPVIL ELGGQNPTVV DATANLDIAI DRIAWGHNAI
SGQWCIAPGY VYVHHSIADD FIARIKRSLT AMYGEDPSRS PDFARMISAH DAQRVANYIQ
PEKVVHGGRF DIPGRYVEPT VLYPSSWDDP AMQQEIFGPV LPVLPYDDLD EVIETIKRKP
KSLAAYIFSK DQRAIDRFLG SVSFGGGCVN QTNLHCWIDS LPFGGVGLSG MGKYYGQAGF
DALSNTKSLL IGNPDKVLDV FPPYAGKDIA TSLALFAS