| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0994 |
|---|
| Symbol | era |
|---|
| ID | 8018626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1044692 |
|---|
| End bp | 1045630 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644829773 |
|---|
| Product | GTP-binding protein Era |
|---|
| Protein accession | YP_002980966 |
|---|
| Protein GI | 241662606 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1159] GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.307835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0847852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA CCCCATTGCA GCCTCCGCAG CCAGAATCCG GCGTGCCGGA GGGGTTCCGC
TGCGGCATGG TCGCCATTGT CGGGCGACCG AACGTTGGCA AATCCACGCT GATGAACGCC
CTGGTGGGCC AGAAGGTCAG CATCACTTCG CGCAAGGCGC AGACCACGCG CCACCGCATC
ACCGGCATTC AGACGACCGA TGACGCGCAG TTCGTCTTCG TCGATACGCC GGGCTTCCAG
ACACGTCACG CCACCGCGCT GAATCGTTCG CTGAACCGCG CCGTCACGTC CACGCTCACG
TCGGTGGACG CCGTGTTGTT CGTGGTCGAA GCCGGCCGCT ACGGCCCGGA CGACGAAAAG
GTGCTTTCGC TGCTGCCGCG CGAGACGCCT GTGATCCTGA TCGTCAACAA GGTCGACCGG
CTCGATGCGT ACACGCGCGC CGAGATGGTT GCCGTGTTCC TGCAGGACAT GGCGCAGGTG
TTTCCGTTTG CGGAAATTGT GCCGATGTCG GCCAAGAACC GCGACGACAT CGACCGTCTG
CTCGGCATCG TGCGCCCGTA CCTGCCGGAA GGCGAGCCGA TGTACGACCC CGAAGCGCTG
ACCGATCGCA GCGAGCGCTT CCTGGCCGCC GAAATCGTTC GCGAAAAGGT CTTCCGTTGG
ACTGGCGACG AGTTGCCGTA TTCCAGCACC GTCATCGTCG ACAAATTCGA GACCGAGGGC
CGGCTGCGCC GCGTGTTTGT GACCATCCTA GTCGACCGGG ACGCACACAA GGCGATGATC
ATTGGCGCGA AGGGCGCCAA GCTCAAGCAG ATCTCTACCG AAGCCCGCAT GGACATGGAA
AAACTGTTCG ACGGCAAGGT GTATCTGGAG GTCTGGATCA AGGTCAAGAG CGGTTGGGCG
GACAACGAAG CCGGCCTGCG TGCTTACGGC TACGAATAA
|
|---|
| Protein sequence | MSDTPLQPPQ PESGVPEGFR CGMVAIVGRP NVGKSTLMNA LVGQKVSITS RKAQTTRHRI
TGIQTTDDAQ FVFVDTPGFQ TRHATALNRS LNRAVTSTLT SVDAVLFVVE AGRYGPDDEK
VLSLLPRETP VILIVNKVDR LDAYTRAEMV AVFLQDMAQV FPFAEIVPMS AKNRDDIDRL
LGIVRPYLPE GEPMYDPEAL TDRSERFLAA EIVREKVFRW TGDELPYSST VIVDKFETEG
RLRRVFVTIL VDRDAHKAMI IGAKGAKLKQ ISTEARMDME KLFDGKVYLE VWIKVKSGWA
DNEAGLRAYG YE
|
|---|
| |