Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0993 |
Symbol | rnc |
ID | 8018625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1043913 |
End bp | 1044683 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829772 |
Product | ribonuclease III |
Protein accession | YP_002980965 |
Protein GI | 241662605 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0631846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0801733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCTGG ATGCACTACA GCAACGTCTT GGCTACCGCT TCAGCAAACC GGAGTTGCTG CAGCAGGCGC TCACCCATCG CAGCCACAGC GCGATGCATA ACGAGCGCCT GGAATTTCTT GGTGATTCGA TTCTGAATTG CGCCGTCGCC GACATGCTCT ACGGCATGTT CGGCAAGCTG GATGAGGGCG ATCTGTCGCG CGTGCGGGCC AATCTGGTCA AGCAACAGGC GCTGTACGAG ATCGCGCAGA TGCTGCAGTT GCCCGATGCC CTGCGTTTGG GCGAAGGCGA ATTGAAAAGC GGCGGTTTCC GCCGCCCATC TATCCTGGCC GATGCGCTGG AAGCGATTTT CGGGGCGGTG TTTCTCGACG GTGGCTTCGA TGCAGCCCGC ACGCTGATTC GCAAGCTGTA CATCCCCATC CTCGAGCAGG TGGACCCGCG CACGCTCGGC AAGGACGCCA AGACGCTGTT GCAGGAGTAC CTCCAAGGTC ACAAGATTGC GTTGCCGCTG TACACGGTGG TGGCCACCCA CGGCGCGGCG CATAATCAGC AGTTCGAGGT CGAGTGTTCG ATTCCCAAGT TGGAGATTCG CGTCTCCGGC AGCGGGGCAT CGCGGCGCGC GGCCGAACAA TCGGCGGCCA AGCTGGCCTT GGAAGAAGCG CATCGCCTGG TGCCGCAGCT CGTCAAGCGC AGCCGCGCCG AGCGCACCGG CAAGACGCGC AAGCAGGCCA CGCCGCCCGA TCCGCAGTTG TCTCTCAGGT TGAAGGAATA A
|
Protein sequence | MSLDALQQRL GYRFSKPELL QQALTHRSHS AMHNERLEFL GDSILNCAVA DMLYGMFGKL DEGDLSRVRA NLVKQQALYE IAQMLQLPDA LRLGEGELKS GGFRRPSILA DALEAIFGAV FLDGGFDAAR TLIRKLYIPI LEQVDPRTLG KDAKTLLQEY LQGHKIALPL YTVVATHGAA HNQQFEVECS IPKLEIRVSG SGASRRAAEQ SAAKLALEEA HRLVPQLVKR SRAERTGKTR KQATPPDPQL SLRLKE
|
| |