Gene Rpic12D_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0982 
SymbolfabG 
ID8018614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1033104 
End bp1033853 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID644829761 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_002980954 
Protein GI241662594 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.629035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0572265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CATTGAACAA TCAGGTCGCG CTCGTTACCG GTGCCTCGCG CGGCATCGGT 
CGTGCCATCG CGTTGGAACT GGCCCGTCAG GGCGCAACGG TGGTGGGTAC GGCCACGTCG
GAAGCCGGCG TACAAGCCAT CACGGCTTAC TTTGCAGAAG CCGGTGTGAA AGGCACGGGC
GTGGTGCTCA ACGTGAATGA CGCTGCGCGT TGCGAAGCCG TCATCGACGA AACCATCAAG
ACGCACGGTG GCCTGAACAT TCTCGTCAAC AATGCCGGCA TCACGCAGGA CAACCTGGCG
ATGCGCATGA AGGACGACGA GTGGGTGTCC GTCATCGATA CGAACCTCTC CGCCGTGTTC
CGCCTGTCGC GCGCCGTGCT GCGCCCGATG ATGAAGGCAC GCGGTGGCCG TATCATCAAC
ATCACTTCGG TGGTGGGCTC GGCCGGCAAC CCGGGTCAAG CCAACTACGC CGCGGCCAAG
GCGGGCGTGG AGGGCATGTC CCGCGCGCTG GCACGTGAGA TCGGCAGTCG TAACATCACC
GTGAACTGTA TCGCGCCGGG CTTTATCGAC ACTGACATGA CGAAGGTCCT GTCCGAAGAG
CAACATACCG CGCTGAAGGC GCAGATTCCG CTGGGCCGCC TTGGCGCTCC GGAAGACATC
GCCAGCGCAG TTGCCTTCCT GGCGTCACCG GCGGCGGGCT ACATTACCGG CTCGACGCTG
CACGTCAACG GCGGCATGTA CATGGGATAA
 
Protein sequence
MTQALNNQVA LVTGASRGIG RAIALELARQ GATVVGTATS EAGVQAITAY FAEAGVKGTG 
VVLNVNDAAR CEAVIDETIK THGGLNILVN NAGITQDNLA MRMKDDEWVS VIDTNLSAVF
RLSRAVLRPM MKARGGRIIN ITSVVGSAGN PGQANYAAAK AGVEGMSRAL AREIGSRNIT
VNCIAPGFID TDMTKVLSEE QHTALKAQIP LGRLGAPEDI ASAVAFLASP AAGYITGSTL
HVNGGMYMG