Gene Rpic12D_0980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0980 
Symbol 
ID8018612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1031147 
End bp1032127 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content64% 
IMG OID644829759 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_002980952 
Protein GI241662592 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.107285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGTT TCGCAAGGAT CATCGGTACG GGCAGCTACT TGCCGCCCAA GCGGGTTACC 
AATGACGAAC TGGCGGCCCA GTTGGCCGAG AAGGGTATTG AGACGAGCGA CGAATGGATC
GTCTCGCGCA GCGGCATTCG GGCGCGTCAT TTCGCCGAGC CGGATGTTAC GTGCAGCGAC
CTCGCCGTGA GGGCGGCCGA GCGCGCGATC GAAGCCGCCG GCATCGATCG CTCCGAACTC
GACCTGATCC TGGTGGCGAC GTCCACGCCG GATTTCGTGT TCCCAAGCAC GGCGTGCCTG
GTGCAGCAGA AGCTCGGCAT CACCAACGGG TGCGCCGCGT TCGACGTGCA GGCCGTGTGT
TCCGGCTTCG TCTACGCGCT GGCAACGGCC GACAAATTTA TCCGCTCGGG TGCCTATCGC
AACGTGCTGG TGATTGGCTC CGAAGTCTTC TCGCGCATCA TCGATTTCAC CGATCGCACC
ACTTGTGTGC TGTTTGGCGA TGGCGCTGGC GCCGTGGTGC TGCAGGCTTC TGACGAGCCG
GGCATCCTGT CGACTGCGCT GCATGCTGAC GGCAGCCACG CCAACATCCT GTGCGTGCCG
GGCAACGTGG CCGCGGGCGC AATCCAGGGC AGCGCCTTCC TCTACATGGA TGGTCAGGCT
GTCTTCAAGC TGGCCGTCAC GGTGCTCGAC AAGGTTGCCC GTGAAGCACT GGCAGCAGCG
GAACTCGATG CCTCGCAAGT CGACTGGTTG ATCCCGCACC AGGCGAACAT CCGCATCATG
CAGGGCACGA CCAAGAAGCT GGGCCTCTCG AACGAGCGCC TGATCGTGAC CGTCGATGAA
CATGGCAACA CGTCTGCAGC CTCGATTCCG CTGGCGCTCG ACGTTGCTGT GCGCGACGGC
CGCATCCAGC GCGGCCAGCA TGTGATGCTC GAGGGCGTGG GCGGCGGCTT CACCTGGGGC
GCCGCGCTGC TGCGCTTCTG A
 
Protein sequence
MTRFARIIGT GSYLPPKRVT NDELAAQLAE KGIETSDEWI VSRSGIRARH FAEPDVTCSD 
LAVRAAERAI EAAGIDRSEL DLILVATSTP DFVFPSTACL VQQKLGITNG CAAFDVQAVC
SGFVYALATA DKFIRSGAYR NVLVIGSEVF SRIIDFTDRT TCVLFGDGAG AVVLQASDEP
GILSTALHAD GSHANILCVP GNVAAGAIQG SAFLYMDGQA VFKLAVTVLD KVAREALAAA
ELDASQVDWL IPHQANIRIM QGTTKKLGLS NERLIVTVDE HGNTSAASIP LALDVAVRDG
RIQRGQHVML EGVGGGFTWG AALLRF