Gene Rpic12D_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0977 
Symbol 
ID8018609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1029027 
End bp1029563 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content63% 
IMG OID644829756 
Productprotein of unknown function DUF177 
Protein accessionYP_002980949 
Protein GI241662589 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.105676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTTC GTACATTCGA TCTTTTCGCG TTCATTCGCG CGGGTGAGCC AGCAAGCGGT 
ACGGTCTCTC TGACCGAGAT GCCTCGCCTG CTGGCCGAGC AAGCCGCCGA TGCCCCCGCT
GACGCCAACA CGCCGTTCAG TTGGCACTTG CAGGGTCTGG TGCGCGAGGA GGCTACCGCG
GGCCAGTTGC CGCGTCAGCG TCTCTTCGTG GATCTTGAAG TGGAGGGTGC AGTCTGGCTG
CAATGCCAGC GATGCCTCAA AGCTTACGAG CAGCCGCTCC CGGTGCGCAC GCGCCTGGAA
GTCATGCGTT CGGAAGCCGA GGCAGATGCC GCCCCGCTGG ATGACGACGA GGCTGACGTC
ATCGTCGGCT CGCGCCACTT TGATCTGATC ACGCAGATCG AAGACGAGCT GTTGCTGGCG
CTACCGGTGT CGCCGCGTCA TGCCGTCTGC CCGGATGAGG TGTTGCCGGA AGAGGCTGAA
GCCGAAAAGA AGCCGTCGCC GTTCGCGGTG CTGGCCAACC TGAAGACCAA ACATTAG
 
Protein sequence
MDFRTFDLFA FIRAGEPASG TVSLTEMPRL LAEQAADAPA DANTPFSWHL QGLVREEATA 
GQLPRQRLFV DLEVEGAVWL QCQRCLKAYE QPLPVRTRLE VMRSEAEADA APLDDDEADV
IVGSRHFDLI TQIEDELLLA LPVSPRHAVC PDEVLPEEAE AEKKPSPFAV LANLKTKH