| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0961 |
|---|
| Symbol | |
|---|
| ID | 8018593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 1010716 |
|---|
| End bp | 1011885 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644829740 |
|---|
| Product | nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_002980933 |
|---|
| Protein GI | 241662573 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0623252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCC GCTCGCTGCT CGATACCGAT CTGTACAAAT TCACGATGAT GCAGGTGGTG
CTGCATCACT TTCCCGGCGC GCATGTCGAA TACCGCTTCA AGTGCCGCAA CGCGGGCGTC
GATCTGGTGC CGTTCATTGA GGAGATTCGC GCCGAGATCC GCCAGCTCTG CACCCTGCGC
TTTACCGATG CAGAACTCGA TTACCTGCGC GGCATGCGCT TCATCAAGAG CGATTTCGTC
GATTTTCTCG GGCTGTTCCA TCTCAACGAG AAGTACATCG ACCTGCGTCA GGCACCCAGC
AACGATGGGC AGATCGAGAT CGTCATCGCG GGGCCGTGGC TGCACACGAT CATGTTCGAG
GTGCCCGTTC TGGCCATCGT CAACGAGGTG TTCTTCAGCC GCACGCAGAC GCACCCGCAG
TGGGAGGAGG GCAAACGCCG CCTGACCGAC AAGCTGGCAT CGCTGAAGCG CCCCGGCCTG
GAAGACTGCC GCATTGCCGA CTACGGCACC CGCCGCCGTT TTTCGCACAC CTGGCATGAG
CATGTGCTGC TGGAGACGCA TGCGCAACTC GGCGCCCAGT ACGCGGGCAC GAGCAACGTC
TACTTCGCCA TGAAGCACGG CATGACGCCG CTGGGTACCA TGGCGCATGA ATACCTGCAG
GCCTGCCAAG CGCTGGGTCC GCGCCTGCGC GATTCCCAGA CCTTTGCGCT GGAAACCTGG
GCCAAGGAAT ATCGCGGCGA CCTCGGCATC GCGCTGTCGG ATACCTACGG CTTTGACGCC
TTCCTGCGCG ATTTCGACAT GTTCTTCTGC AAGCTCTTCG ACGGCGTTCG CCATGATTCT
GGCGACCCGT TCGAGTGGGG CGAGCGCATG CTCAAGCATT ACGACGACAT GCGCGCCGAG
CCGAAGTCCA AGGCGCTGAT CTTCTCCGAC AGCCTCGACA TGCCGAAGGT CATCGGCCTG
TATGAGCGCT TTCATGGCCG CTGCAAGCTG GCGTTTGGCG TGGGGACCAA TCTGACAAAC
GACCTGGGCT ACACGCCGCT GCAGATCGTC ATCAAGATGG TCCGCTGCAA TGGCCAGCCG
GTGGCCAAAC TGTCGGACGC GCCGGAGAAG ACGATGTGCG ACGATCCAGC GTACCTCACG
TACCTGAAGC AGGTATTTGG CGTGCAATAA
|
|---|
| Protein sequence | MIIRSLLDTD LYKFTMMQVV LHHFPGAHVE YRFKCRNAGV DLVPFIEEIR AEIRQLCTLR
FTDAELDYLR GMRFIKSDFV DFLGLFHLNE KYIDLRQAPS NDGQIEIVIA GPWLHTIMFE
VPVLAIVNEV FFSRTQTHPQ WEEGKRRLTD KLASLKRPGL EDCRIADYGT RRRFSHTWHE
HVLLETHAQL GAQYAGTSNV YFAMKHGMTP LGTMAHEYLQ ACQALGPRLR DSQTFALETW
AKEYRGDLGI ALSDTYGFDA FLRDFDMFFC KLFDGVRHDS GDPFEWGERM LKHYDDMRAE
PKSKALIFSD SLDMPKVIGL YERFHGRCKL AFGVGTNLTN DLGYTPLQIV IKMVRCNGQP
VAKLSDAPEK TMCDDPAYLT YLKQVFGVQ
|
|---|
| |