| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0945 |
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| Symbol | |
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| ID | 8018577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 995965 |
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| End bp | 996972 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644829724 |
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| Product | Monosaccharide-transporting ATPase |
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| Protein accession | YP_002980917 |
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| Protein GI | 241662557 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0035821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.067207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTCTG ATTCCACCCT GCCCCCGACG CCGCCCGCTG CGACTGCCGG CACGCGCGCG
GCGCTGGGCA TGTCGCTTGG CACCATCGGC GGGTTGCTCG CTGCGCTGAT CGCCATGCTG
GTGCTGTTCG GCACGCTGTC GCCAACGTTC TTCTCGCTGC CCACGTTCAC AACCATCGCC
AACGAGATTC CCGACCTGCT CGTGATGGCG GTGGGCATGA CATTCATCCT GATGATCGGC
GGCATTGATC TGTCGGTGGG CTCGGTGCTG GCGCTGTCGG CTTCGGTGCT GTCGGTGGCC
ATGAGCCAAT TGGGTTGGGG CTTGTTGCCG GCTGCGCTGG CGGGCGTGGT GCTGGCCACG
GCGGCCGGCA TGCTGACGGG CGCGGTCACG GTGCACTGGG GCATTCCGTC GTTCATCGTG
TCACTGGGCG TGCTGGAAAT GGCGCGGGGC CTCGCCTACA GCCTCACCGA TTCGCGCACG
GTGTACATCG GCAGCGCGGT CGACTGGCTG GCCAACCCCA TCGCGCTGGG CATCGCGCCG
TCGTTCCTGA TTGCGATTGC CATCACGGTG GTTGGCCAGA TCGTGCTGGT GCGCACGGTG
TTTGGCCGCT ACCTGGTGGC CATCGGCACC AATGAAGAAG CCGTGCGGCT GGCGGGCGTG
AATCCGCGCC CCTACAAGAT TGCGGTGTTC GCGCTGATGG GGCTGCTCTC GGGCCTGGCT
GCGTTGTTCC AGGTGTCGCG CCTGGAAGCC GCCGATCCGA ATGCTGGCGT CGGCATGGAG
CTGCAGGTGA TCGCGGCCGT GGTGATCGGC GGCACGAGCC TGATGGGCGG ACGCGGGTCA
GTCGTGCGCA CGCTGTTCGG CGTGCTGATC ATCTCGGTGC TCGAATCGGG CCTTGCACAG
ATCGGCGCCT CCGAGCCCAC CAAACGCATC ATCACGGGCG CGGTCATCGT CGCGGCCGTG
GTCATGGATA CCTATCGCAG CAAGCGCAAC CGCAGCAAAC ACCATTAA
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| Protein sequence | MRSDSTLPPT PPAATAGTRA ALGMSLGTIG GLLAALIAML VLFGTLSPTF FSLPTFTTIA
NEIPDLLVMA VGMTFILMIG GIDLSVGSVL ALSASVLSVA MSQLGWGLLP AALAGVVLAT
AAGMLTGAVT VHWGIPSFIV SLGVLEMARG LAYSLTDSRT VYIGSAVDWL ANPIALGIAP
SFLIAIAITV VGQIVLVRTV FGRYLVAIGT NEEAVRLAGV NPRPYKIAVF ALMGLLSGLA
ALFQVSRLEA ADPNAGVGME LQVIAAVVIG GTSLMGGRGS VVRTLFGVLI ISVLESGLAQ
IGASEPTKRI ITGAVIVAAV VMDTYRSKRN RSKHH
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