Gene Rpic12D_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0940 
Symbol 
ID8018572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp988035 
End bp989231 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content63% 
IMG OID644829719 
Productaromatic amino acid aminotransferase 
Protein accessionYP_002980912 
Protein GI241662552 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1448] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.131474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTT TCTCCGCCGT CGAACTGGCT CCGCGCGATC CCATCCTGGG CCTGAATGAA 
GCTTTCAACG CCGATACCCG CAGCACCAAA GTGAATCTGG GCGTGGGCGT GTACTTCACC
GACGAAGGGA AAATTCCGGT GCTGCGCGCC GTGCAGGAAG CCGAAAAGGC CCGCCTGGCC
GCCGCTGCTC CGCGCGGCTA CCTGCCGATC GAAGGCATCG CCGCCTACGA CCAGGCTGTG
CAGAAGCTGT TGTTCGGCGC TGATTCGCCC CTCATCACCG AAGGCCGCGT GGTCACCGCG
CAAGCCCTGG GCGGCACCGG CGCGCTGAAG ATCGGCGCCG ACTTCCTCAA GCGCCTGTAC
CCGAACGCCA AGGTCGCGAT TTCCGACCCG AGCTGGGAAA ACCATCGCGC GCTGTTCGAG
TCGGCCGGTT TCGAAGTCGT CAACTACGCG TACTACGATG CCCCGTCGCA CGGCCTGAAC
TTCGCCAGCA TGATGGATTC GCTGAACAGC TACGCGCCGA ACACCATCGT CGTGCTGCAC
GCCTGCTGCC ACAACCCGAC TGGCGTGGAC ATGACCACCG AGCAGTGGAA GCAGGTCGTG
GAAGTCATCA AGGCCAAGAA CCTGATCCCG TTCCTCGACA TGGCTTACCA AGGCTTCGCC
GACGGCATCC AGCAAGACGG CCTGGCTGTG CGCCTGTTTG CTGAATCGGG CCTGCCGTTC
TTCGTCTCCA GCTCGTTCTC GAAGTCGTTC TCGCTGTACG GCGAGCGCGT CGGCGCGCTG
TCGATCGTGA CGACCAGCAA GGACGAAGCC ACCCGCGTGC TGTCGCAAGT CAAGCGCGTG
ATCCGCACGA ACTACTCGAA CCCGCCGACG CACGGCGGCA CGATCGTCGC CAGCGTGCTG
ACGAGCCCCG AGCTGCGCGC GATGTGGGAG CAGGAACTGG GCGAAATGCG CGATCGCATC
AAGTCGATGC GCAATGCACT GGTCGACAAA CTGGCCGCCA AGGGCGTGAA GACCGACTTC
TCGTTCGTAA AGGCACAGCG CGGCATGTTC TCGTACTCGG GCCTGACCTC CGCACAAGTG
GATCGCCTGC GTACCGAGCA CGGCATCTAC GCTGTGTCGA CCGGCCGTAT CTGCGTGGCC
GCGCTGAACA CCCACAACAT CGACGCCGTG GTGAACGCCA TTGCAGATGT GCTGTAA
 
Protein sequence
MSLFSAVELA PRDPILGLNE AFNADTRSTK VNLGVGVYFT DEGKIPVLRA VQEAEKARLA 
AAAPRGYLPI EGIAAYDQAV QKLLFGADSP LITEGRVVTA QALGGTGALK IGADFLKRLY
PNAKVAISDP SWENHRALFE SAGFEVVNYA YYDAPSHGLN FASMMDSLNS YAPNTIVVLH
ACCHNPTGVD MTTEQWKQVV EVIKAKNLIP FLDMAYQGFA DGIQQDGLAV RLFAESGLPF
FVSSSFSKSF SLYGERVGAL SIVTTSKDEA TRVLSQVKRV IRTNYSNPPT HGGTIVASVL
TSPELRAMWE QELGEMRDRI KSMRNALVDK LAAKGVKTDF SFVKAQRGMF SYSGLTSAQV
DRLRTEHGIY AVSTGRICVA ALNTHNIDAV VNAIADVL