Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0940 |
Symbol | |
ID | 8018572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 988035 |
End bp | 989231 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829719 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_002980912 |
Protein GI | 241662552 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.131474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTTT TCTCCGCCGT CGAACTGGCT CCGCGCGATC CCATCCTGGG CCTGAATGAA GCTTTCAACG CCGATACCCG CAGCACCAAA GTGAATCTGG GCGTGGGCGT GTACTTCACC GACGAAGGGA AAATTCCGGT GCTGCGCGCC GTGCAGGAAG CCGAAAAGGC CCGCCTGGCC GCCGCTGCTC CGCGCGGCTA CCTGCCGATC GAAGGCATCG CCGCCTACGA CCAGGCTGTG CAGAAGCTGT TGTTCGGCGC TGATTCGCCC CTCATCACCG AAGGCCGCGT GGTCACCGCG CAAGCCCTGG GCGGCACCGG CGCGCTGAAG ATCGGCGCCG ACTTCCTCAA GCGCCTGTAC CCGAACGCCA AGGTCGCGAT TTCCGACCCG AGCTGGGAAA ACCATCGCGC GCTGTTCGAG TCGGCCGGTT TCGAAGTCGT CAACTACGCG TACTACGATG CCCCGTCGCA CGGCCTGAAC TTCGCCAGCA TGATGGATTC GCTGAACAGC TACGCGCCGA ACACCATCGT CGTGCTGCAC GCCTGCTGCC ACAACCCGAC TGGCGTGGAC ATGACCACCG AGCAGTGGAA GCAGGTCGTG GAAGTCATCA AGGCCAAGAA CCTGATCCCG TTCCTCGACA TGGCTTACCA AGGCTTCGCC GACGGCATCC AGCAAGACGG CCTGGCTGTG CGCCTGTTTG CTGAATCGGG CCTGCCGTTC TTCGTCTCCA GCTCGTTCTC GAAGTCGTTC TCGCTGTACG GCGAGCGCGT CGGCGCGCTG TCGATCGTGA CGACCAGCAA GGACGAAGCC ACCCGCGTGC TGTCGCAAGT CAAGCGCGTG ATCCGCACGA ACTACTCGAA CCCGCCGACG CACGGCGGCA CGATCGTCGC CAGCGTGCTG ACGAGCCCCG AGCTGCGCGC GATGTGGGAG CAGGAACTGG GCGAAATGCG CGATCGCATC AAGTCGATGC GCAATGCACT GGTCGACAAA CTGGCCGCCA AGGGCGTGAA GACCGACTTC TCGTTCGTAA AGGCACAGCG CGGCATGTTC TCGTACTCGG GCCTGACCTC CGCACAAGTG GATCGCCTGC GTACCGAGCA CGGCATCTAC GCTGTGTCGA CCGGCCGTAT CTGCGTGGCC GCGCTGAACA CCCACAACAT CGACGCCGTG GTGAACGCCA TTGCAGATGT GCTGTAA
|
Protein sequence | MSLFSAVELA PRDPILGLNE AFNADTRSTK VNLGVGVYFT DEGKIPVLRA VQEAEKARLA AAAPRGYLPI EGIAAYDQAV QKLLFGADSP LITEGRVVTA QALGGTGALK IGADFLKRLY PNAKVAISDP SWENHRALFE SAGFEVVNYA YYDAPSHGLN FASMMDSLNS YAPNTIVVLH ACCHNPTGVD MTTEQWKQVV EVIKAKNLIP FLDMAYQGFA DGIQQDGLAV RLFAESGLPF FVSSSFSKSF SLYGERVGAL SIVTTSKDEA TRVLSQVKRV IRTNYSNPPT HGGTIVASVL TSPELRAMWE QELGEMRDRI KSMRNALVDK LAAKGVKTDF SFVKAQRGMF SYSGLTSAQV DRLRTEHGIY AVSTGRICVA ALNTHNIDAV VNAIADVL
|
| |