Gene Rpic12D_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0936 
Symbol 
ID8018568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand- 
Start bp984163 
End bp984807 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID644829715 
Productendonuclease III 
Protein accessionYP_002980908 
Protein GI241662548 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0591838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG CCAAGCGCCA CGCCATCTTC GAGACCCTGC GCGAGAACAA CCCGACGCCG 
ACCACCGAGC TGGAATACAC CACGCCGTTC GAACTGCTGA TCGCGGTGCT GCTGTCGGCA 
CAGGCGACCG ACGTTGGCGT GAACAAGGCG ACGCGCAAGC TGTTTCCGGT GGCCAATACG 
CCCGCCAAGC TGCTGGCGCT TGGCGAGGAG GGCATCACCG AATACATCAA GACCATCGGG 
CTGTATCGGA CCAAGTGCAA GCACATCCTC CAGACGTGCC GCATCCTGCT CGACCAATAC 
GGCGGTGAAG TGCCGCGTGA CCGCGCCGCG CTGGAAGAAC TCCCGGGTGT AGGCCGCAAG 
ACCGCCAACG TGGTGATGAA CACGGCCTTT GGTGAGCCGA CAATCGCGGT CGACACGCAC 
ATTTTTCGCG TCGCCAATCG CACGGGCCTG GCCCCCGGCA AGAACGTCCT TGAGGTCGAG 
CTGAAGCTGA TGAAGGTGGT GCCGGAAGCG TTTCGGCAAG ACGCGCACCA CTGGCTGATC 
CTGCATGGGC GCTATGTGTG CAAGGCGCGC AAGCCCGAGT GCTGGCATTG CGCAATCGAG 
CCGCTGTGTG AATTCAGGCC GAAGACGCCA GCGCCGAAGG AATGA
 
Protein sequence
MNPAKRHAIF ETLRENNPTP TTELEYTTPF ELLIAVLLSA QATDVGVNKA TRKLFPVANT 
PAKLLALGEE GITEYIKTIG LYRTKCKHIL QTCRILLDQY GGEVPRDRAA LEELPGVGRK 
TANVVMNTAF GEPTIAVDTH IFRVANRTGL APGKNVLEVE LKLMKVVPEA FRQDAHHWLI 
LHGRYVCKAR KPECWHCAIE PLCEFRPKTP APKE