Gene Rpic12D_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0920 
Symbol 
ID8018552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp969117 
End bp971048 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content63% 
IMG OID644829699 
Productheat shock protein 90 
Protein accessionYP_002980892 
Protein GI241662532 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0784845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TGAGCGCACC GCACGAGAAG ATGGCTTTCC AGGCAGAAGT GAAGCAGCTT 
CTGCATCTGA TGATCCACTC GCTGTACAGC AACAAGGAAA TCTTCCTGCG GGAACTGGTT
TCCAATGCGT CCGATGCGGT GGACAAGCTT CGTTTTGAGG GCATCGCCAA TCCGTCGCTG
CTGGAAGGCG GCGGCGAGCT TGGCATCCGC ATCGGCTTTG ATGCGGCCGC GCGCACCATC
ACGATCGCCG ACAACGGTAT CGGCATGAGC CGCGACGAGG CCATCCGCAA CCTCGGCACC
ATCGCCCGCT CGGGCACGCG CGAGTTCTTC AGCCAGCTTT CGGGCGACCA GCAGAAGGAT
GCTGCCCTGA TCGGCCAGTT TGGCGTGGGT TTCTACTCGG CGTTTATCGT GGCCGACCGC
GTGACGGTGG AATCGCGCCG CGCCGGTGTG GCCGCCAATG AAGCCGTGCG CTGGGAAAGC
ACCGGCGACG GCGAATTCAC CGTCGACAGC ATCGAACGTG CCGAGCGAGG CACCACCATC
ACGCTGCACC TGCGCGAGGG TGAGGACGAT TTCCTCTCCG CCTGGCGCAT CAAGTCTGTC
GTGCAAAAGT ATTCGGACCA CATCTCCCTG CCAATCCAGA TGCGCAAGGA AGCGTGGGAC
GAAGAGAAGA AGGCGATGGT GGCCCAGGAC GAATGGGAAA CGATCAACCA GGGCAGCGCG
CTGTGGGCCC GTCCGCGCGC TGACGTGACC GATGATCAGT ACATCGCGTT CTACCAGCAC
ATTGCCCACG AAAACGGCAA GCCGATCGCC TGGACGCACA ACCGCGTGGA AGGCCGTAGC
GAATACACGC AGCTGCTGTA CCTCCCGACC AACGCGCCGT TCGACCTGTG GGACCGCGAG
CGCCGCAGCG GCCTGAAGCT GTACGTCAAG CGTGTCTTCA TCATGGACGA CGCAGAGCAA
CTGCTGCCGG GCTACCTGCG TTTTGTGAAG GGCGTGATCG ATTCGGCCGA TCTGCCGTTG
AATGTCTCGC GCGAAATCCT GCAGGAAAGC CGCGACGTGA AGGCTATCCG CGAAGGCTCC
ACCAAGCGCG TGCTGGGCAT GCTGGAATCG ATGGCCGAGT CGGATGACGC GGCCGAGAAG
GAAAAGTACG CCACGTTCTG GCATAACTTC GGCCAGGTGC TCAAGGAGGG CATCGGCGAA
GACCTCGCCA ATAAAGACCG CATTGCCAAG CTGCTGCGCT TCGCTTCCAC GCACAACGAA
GACAGCGCCC AGACCGTCTC GCTGGCCGAT TACGTCGGCC GCATGAAGGA AGGCCAGGAC
AAGATCTACT ACGTCACCGC CGAAAACTGG ACGGCCGCCA AGTCGAGCCC GCATCTGGAA
ATCTTCCGCA AGAAGGGTGT GGAAGTGCTG CTGCTGACCG ACCGCGTGGA CGAGTGGATG
CTGTCGTTCC TGCACGACTT TGAAGAGAAG GAACTGGTGT CGGTGGCGCG CGGTGATCTC
GACCTGGGCG CCTTGGAAGA CGAAGCCGAG AAGGCCGAGC ACGCCAAGGT GGAAGGCGAG
TTCAAGCCGC TGGTCGAGCG CGCCAAGGCG GTGCTCGGCG ACAAGGCCAA GGACGTGCGC
ATCACGCATC GCCTGACCGA TTCGCCGTCG TGCCTGGTGG CCGATGAAGG CGACATCAGC
GGCACGCTGG CCCGTCTGCT CAAGCAGGCC GGCCAACAGG CGCCTGACAG CAAACCCGTG
CTGGAACTGA ACCCGACGCA CCCGCTTGTG CGCAAGCTCG CGCTGCTGGA AACCGTGACC
GGCAACGAAG CCGACCGCGC CGCGTTTGAA GATCGCCTGC ATGTGCTGTT CGATCAGGCA
CTGTTGGCAG AGGGTGGCGC ATTGGCCGAC CCGGCAGCCT ACGTGCAACG TGTGAACCGC
CTGCTGGCCT GA
 
Protein sequence
MQTMSAPHEK MAFQAEVKQL LHLMIHSLYS NKEIFLRELV SNASDAVDKL RFEGIANPSL 
LEGGGELGIR IGFDAAARTI TIADNGIGMS RDEAIRNLGT IARSGTREFF SQLSGDQQKD
AALIGQFGVG FYSAFIVADR VTVESRRAGV AANEAVRWES TGDGEFTVDS IERAERGTTI
TLHLREGEDD FLSAWRIKSV VQKYSDHISL PIQMRKEAWD EEKKAMVAQD EWETINQGSA
LWARPRADVT DDQYIAFYQH IAHENGKPIA WTHNRVEGRS EYTQLLYLPT NAPFDLWDRE
RRSGLKLYVK RVFIMDDAEQ LLPGYLRFVK GVIDSADLPL NVSREILQES RDVKAIREGS
TKRVLGMLES MAESDDAAEK EKYATFWHNF GQVLKEGIGE DLANKDRIAK LLRFASTHNE
DSAQTVSLAD YVGRMKEGQD KIYYVTAENW TAAKSSPHLE IFRKKGVEVL LLTDRVDEWM
LSFLHDFEEK ELVSVARGDL DLGALEDEAE KAEHAKVEGE FKPLVERAKA VLGDKAKDVR
ITHRLTDSPS CLVADEGDIS GTLARLLKQA GQQAPDSKPV LELNPTHPLV RKLALLETVT
GNEADRAAFE DRLHVLFDQA LLAEGGALAD PAAYVQRVNR LLA