Gene Rpic12D_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0888 
Symbol 
ID8018519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp926773 
End bp927276 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content64% 
IMG OID644829667 
ProductDihydrofolate reductase 
Protein accessionYP_002980861 
Protein GI241662501 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.733276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.450678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTC TGACGCTCAT CGTCGCCCGC GCCCGCAATG GCGTGATCGG CCGCAACAAC 
ACGCTGCCCT GGCGCCTGCC AGAAGACCTC GCGCACTTCA AGCGCACCAC AATGGGCGCA
CCCATCGTAA TGGGCCGCAA GACGTACGAT TCGATCGGCC GCCCGCTGCC CGGTCGTCGC
AACATTGTCG TCACGCGCAA TGCCAAGCTT GAACTGCCGG GCTGCGAAAT CGCGTATTCG
ATGGAAGACG CGCAACGCCT GTGTGTGGGC GCCGAGCAGA TCTTCCTGAT CGGCGGCGCG
CAACTGTATG CGGATGCCCT GCCGAGCGCG GATCGCCTGA TCGTGACCGA GATCGACGCC
GATTTCGAAG GCGATGCGCA CTTTCCCGCG CCGGACCCCA GGGTCTGGCG CGAAGTCTCC
CGCGAGACGC ACCACGCGGC AGCGCCCAAC GATTTCGACT ACGCGTTCGT TACCTATGAA
CGCCCACCAT CGGACGAGCA GTAA
 
Protein sequence
MTILTLIVAR ARNGVIGRNN TLPWRLPEDL AHFKRTTMGA PIVMGRKTYD SIGRPLPGRR 
NIVVTRNAKL ELPGCEIAYS MEDAQRLCVG AEQIFLIGGA QLYADALPSA DRLIVTEIDA
DFEGDAHFPA PDPRVWREVS RETHHAAAPN DFDYAFVTYE RPPSDEQ