| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0877 |
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| Symbol | trmD |
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| ID | 8018508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 917556 |
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| End bp | 918344 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829656 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_002980850 |
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| Protein GI | 241662490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.557863 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCG ACGTCGTCTC GCTGTTTCCG GACATGTTCC GGGCGCTGAC GGACTGGGGT
ATCACCAGCC GCGCAGCCAA ACAGCAGGTG TACACGTTGC GCACCTGGAA CCCGCGCGAT
TTCACGACGG ACAACTACCG CACCGTGGAC GACCGCCCTT ATGGCGGTGG TCCAGGCATG
GTGATGTTGG CCAAGCCGCT GGAAGCTGCA CTGGACGCGA TTCGCCAGGC GCAAGCGCCG
GCGGCGTCGC ATGTGGTGCT GCTGTCGCCG CAAGGCAAGC CGCTCACGCA CAAGCGGGTG
ATGGAGCTGG CGCAGCTGCC GGCACTCACG TTGCTGTGTG GGCGCTACGA AGCGATCGAT
CAACGCTTGG TCGACCGTCG CGTTGATGAG GAAATCAGCC TTGGCGATTT TGTCCTCTCC
GGCGGCGAGA TTGCGGCGAT GGCGATCATC GACGCGGTAG TGCGACAGTT GCCTGGCGTG
CTGGGCGATG CGCAATCGGC AGTGCAAGAC AGCTTCGTCA ACGGTCTGCT CGACTGCCCG
CACTACACGC GGCCGGAAGA GTACGAAGGT GTGCGTGTGC CCGATGTGCT GCTGGGTGGC
CATCACGCCG AGATCGAGAA GTGGCGCCGC CAGCAGGCGC TGATGAACAC AATGCGCAAG
CGGCCCGATC TCATCGAGGC GGCGCGCAAG CAGGGTTTGT TGTCCCGCAG CGATGAGGTT
TTCCTCGCTG CCGCGGCGAT AACGGCAAAG GGGTCAGAGG CTTCCGTCCC GGAAGGCTCG
GCCAAGTGA
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| Protein sequence | MQFDVVSLFP DMFRALTDWG ITSRAAKQQV YTLRTWNPRD FTTDNYRTVD DRPYGGGPGM
VMLAKPLEAA LDAIRQAQAP AASHVVLLSP QGKPLTHKRV MELAQLPALT LLCGRYEAID
QRLVDRRVDE EISLGDFVLS GGEIAAMAII DAVVRQLPGV LGDAQSAVQD SFVNGLLDCP
HYTRPEEYEG VRVPDVLLGG HHAEIEKWRR QQALMNTMRK RPDLIEAARK QGLLSRSDEV
FLAAAAITAK GSEASVPEGS AK
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