Gene Rpic12D_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0870 
Symbol 
ID8018501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp912717 
End bp913841 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content64% 
IMG OID644829649 
ProductRadical SAM domain protein 
Protein accessionYP_002980843 
Protein GI241662483 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0400323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.723126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC GCCACGTCCC CCGCAAGGGA CGCGGCGCCA CGTCCAATCT GCAAGGCCGC 
TTCGAGCGCG ACGAGCGCAC GCGCGTCGAT GACGGCTGGC AGCCGCTTGT CGGGCACCTC
GATCCGGATG ATGCGCCGCC GCGCATCGAG ACCAGCGTCT CGGTTGAGCG CGCTCGCTCC
ATCCTGAGCC ATAACCAGTC GCCGGATATT CCGTTTGGGG TGTCGCTCAA TCCGTATCGC
GGGTGTGAGC ATGGTTGCGT GTATTGCTTT GCGCGGCCGA CGCATGCGTA TCTGGACTTA
TCGCCGGGGC TCGATTTCGA GACCAAGTTG TTCGCCAAGA CAAATGCCGC CGAGGTGCTG
CGCGAAACGC TGGCCAAGCC AGGCTACCGC TGCGAGGCAA TAGCGCTGGG CGTGAATACC
GATGCATATC AACGGATTGA GCGCGAGTTG CGCATCACAC GCGACGTGTT GCAGGTGCTG
CACGATTGCG ATCACCCGGT CGGGCTGATC ACCAAATCGA CGTTGATCGA GCGCGACATC
GATTTGCTCG CTCCGATGGC GGCGAAGAAC CTCGTCGTAG CCGCCGTCAC CATCACCACG
CTCGACGCTG AACTGGCGCG CAAGCTGGAA CCCCGGGCCG CCACGCCGTC GCGTCGCCTG
CGCACGATTC GCACGCTGGC CGAGGCCGGT ATTCCGGTGG GTGTCAGCGT CGCTCCAATG
ATCCCCTTCG TTACCGACGA CCACATGGAG CAAATCCTGG AAGCCGCGCG CGAGGCGGGC
GCCACGTACG CGAGCTACAT CGTGCTGCGC TTGCCGAACG AGCTGAACGC GGTGTTCCAG
GATTGGCTGA TGGCGCATTT CCCCGTCCGC GCGCAACGCG TGATGAACCG CATCCGCGAT
CTGCACGGCG GCCAAGACTA CAAGGCGGAT TTCGCCACGC GCATGCGCGG CACCGGCATT
TGGGCCGACT TGTTGCGGCA GCGTTTCTAC AAGGCCGCCG ACAGGCTCGG CTTCAGCTAC
CACCGCTACA ACGAACGGGT GCTCGACACC TCGCAGTTCA AGCCCCCCAC GAGCGCCGTC
AAATCGCGAA AGCCGGTCGA CGAGCGCCAA GGCAGCTTGT TTTGA
 
Protein sequence
MSDRHVPRKG RGATSNLQGR FERDERTRVD DGWQPLVGHL DPDDAPPRIE TSVSVERARS 
ILSHNQSPDI PFGVSLNPYR GCEHGCVYCF ARPTHAYLDL SPGLDFETKL FAKTNAAEVL
RETLAKPGYR CEAIALGVNT DAYQRIEREL RITRDVLQVL HDCDHPVGLI TKSTLIERDI
DLLAPMAAKN LVVAAVTITT LDAELARKLE PRAATPSRRL RTIRTLAEAG IPVGVSVAPM
IPFVTDDHME QILEAAREAG ATYASYIVLR LPNELNAVFQ DWLMAHFPVR AQRVMNRIRD
LHGGQDYKAD FATRMRGTGI WADLLRQRFY KAADRLGFSY HRYNERVLDT SQFKPPTSAV
KSRKPVDERQ GSLF