Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0870 |
Symbol | |
ID | 8018501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 912717 |
End bp | 913841 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829649 |
Product | Radical SAM domain protein |
Protein accession | YP_002980843 |
Protein GI | 241662483 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0400323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.723126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGATC GCCACGTCCC CCGCAAGGGA CGCGGCGCCA CGTCCAATCT GCAAGGCCGC TTCGAGCGCG ACGAGCGCAC GCGCGTCGAT GACGGCTGGC AGCCGCTTGT CGGGCACCTC GATCCGGATG ATGCGCCGCC GCGCATCGAG ACCAGCGTCT CGGTTGAGCG CGCTCGCTCC ATCCTGAGCC ATAACCAGTC GCCGGATATT CCGTTTGGGG TGTCGCTCAA TCCGTATCGC GGGTGTGAGC ATGGTTGCGT GTATTGCTTT GCGCGGCCGA CGCATGCGTA TCTGGACTTA TCGCCGGGGC TCGATTTCGA GACCAAGTTG TTCGCCAAGA CAAATGCCGC CGAGGTGCTG CGCGAAACGC TGGCCAAGCC AGGCTACCGC TGCGAGGCAA TAGCGCTGGG CGTGAATACC GATGCATATC AACGGATTGA GCGCGAGTTG CGCATCACAC GCGACGTGTT GCAGGTGCTG CACGATTGCG ATCACCCGGT CGGGCTGATC ACCAAATCGA CGTTGATCGA GCGCGACATC GATTTGCTCG CTCCGATGGC GGCGAAGAAC CTCGTCGTAG CCGCCGTCAC CATCACCACG CTCGACGCTG AACTGGCGCG CAAGCTGGAA CCCCGGGCCG CCACGCCGTC GCGTCGCCTG CGCACGATTC GCACGCTGGC CGAGGCCGGT ATTCCGGTGG GTGTCAGCGT CGCTCCAATG ATCCCCTTCG TTACCGACGA CCACATGGAG CAAATCCTGG AAGCCGCGCG CGAGGCGGGC GCCACGTACG CGAGCTACAT CGTGCTGCGC TTGCCGAACG AGCTGAACGC GGTGTTCCAG GATTGGCTGA TGGCGCATTT CCCCGTCCGC GCGCAACGCG TGATGAACCG CATCCGCGAT CTGCACGGCG GCCAAGACTA CAAGGCGGAT TTCGCCACGC GCATGCGCGG CACCGGCATT TGGGCCGACT TGTTGCGGCA GCGTTTCTAC AAGGCCGCCG ACAGGCTCGG CTTCAGCTAC CACCGCTACA ACGAACGGGT GCTCGACACC TCGCAGTTCA AGCCCCCCAC GAGCGCCGTC AAATCGCGAA AGCCGGTCGA CGAGCGCCAA GGCAGCTTGT TTTGA
|
Protein sequence | MSDRHVPRKG RGATSNLQGR FERDERTRVD DGWQPLVGHL DPDDAPPRIE TSVSVERARS ILSHNQSPDI PFGVSLNPYR GCEHGCVYCF ARPTHAYLDL SPGLDFETKL FAKTNAAEVL RETLAKPGYR CEAIALGVNT DAYQRIEREL RITRDVLQVL HDCDHPVGLI TKSTLIERDI DLLAPMAAKN LVVAAVTITT LDAELARKLE PRAATPSRRL RTIRTLAEAG IPVGVSVAPM IPFVTDDHME QILEAAREAG ATYASYIVLR LPNELNAVFQ DWLMAHFPVR AQRVMNRIRD LHGGQDYKAD FATRMRGTGI WADLLRQRFY KAADRLGFSY HRYNERVLDT SQFKPPTSAV KSRKPVDERQ GSLF
|
| |