| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0859 |
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| Symbol | |
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| ID | 8018490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 900213 |
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| End bp | 901337 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829638 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_002980832 |
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| Protein GI | 241662472 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT CGCTTTCTTC CCGTCGTCCC GTATTGCGCG CCCTGGTGGC TGGCGCAGCG
CTCTCCGCAC TCTCTTTCCC GGCGCTCTCG CTGGCGGCCA AGAAGGCCGC CAAATCGTCC
AAGCGCCGCG TCGCGGTGCA TGAAGAAGAG ATTGATCTCG ATCGTTATCG CAACAACCCG
CAGACGCAGG CCTTCATCGG CATGCTGGTC GCGCAGTACA ACTTTGACCG GACATCGCTC
GATACGCTGT TTGCGGGCAC AGCCTATTCC GCCACGGTGG CGCGCTTGAT CCTGCCGCCG
GCCACACCCG CGCGTCGCAG CTGGACGGCC TATCGCGGCC GCTTCATTGA GCCGATCCGC
ATCGGCGCAG GCGTGCGGTT CTGGCAGCAA TACGGCGACA CACTGCGCCG CGCCGAGAAC
GAATTCGGCG TGCCGGCCGA TGTGATCGTG GGCATCCTTG GCGTGGAGAC CATCTACGGC
CGGGACATGG GCAACTTCCG CGTGATTGAC GCGCTGTCCA CGCTGGCTTT CGACTACCCC
GACACGCCCA ACCGCGAAGA CCGCAGCACG ATGTTCCGCA ATCAGTTGAA GGACTTCCTG
CTCTGGTGCC GCGACACGGG CACGGACACG TTCTCGGTCC TGGGCTCGTA TGCGGGCGCA
GTGGGCATTC CGCAGTTCAT GCCGACCAGC ATTCGCGAAT ACGCCATCGA TTACGATCGC
GACGGCCACA TCGATCTGCG CAACAGCGCG GTGGATGCCA TTGGCAGCGT TGCCCGCTTC
CTGCAAATGC ATGGCTGGGA GCCGAACCGC CCCGTGATGT GGAACATTGC CGGCGATGCC
GATAGCCAGG GCATTGCGGC CGCCGCCGCA GATGGCCAGC CGTATCCCGG CATGACGTTG
TCCAGGCTCA CACGCGCTGG TCTGGCATTG GCTCCGGGTG TGGATACCGC ACGCGAGCAG
GAAACCGAAG TGCTGATGAT CGATCTGCCC ACGCCCGGCC AGCCGACCGA ATACCGCGTC
GGCCTGCGTA ACTTCTACGT GCTCACGCGC TACAACCGCA GCTTCTTCTA TGCGGCGGCG
GTGTACGAGT TGGGCCAGGC CGTGCGGCAG GCGATGCAGG GTTGA
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| Protein sequence | MSQSLSSRRP VLRALVAGAA LSALSFPALS LAAKKAAKSS KRRVAVHEEE IDLDRYRNNP
QTQAFIGMLV AQYNFDRTSL DTLFAGTAYS ATVARLILPP ATPARRSWTA YRGRFIEPIR
IGAGVRFWQQ YGDTLRRAEN EFGVPADVIV GILGVETIYG RDMGNFRVID ALSTLAFDYP
DTPNREDRST MFRNQLKDFL LWCRDTGTDT FSVLGSYAGA VGIPQFMPTS IREYAIDYDR
DGHIDLRNSA VDAIGSVARF LQMHGWEPNR PVMWNIAGDA DSQGIAAAAA DGQPYPGMTL
SRLTRAGLAL APGVDTAREQ ETEVLMIDLP TPGQPTEYRV GLRNFYVLTR YNRSFFYAAA
VYELGQAVRQ AMQG
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