Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0850 |
Symbol | rpsA |
ID | 8018481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 891307 |
End bp | 892995 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644829629 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_002980823 |
Protein GI | 241662463 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.334273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCAAA CTAACGAATC TTTTGCCGCC CTGTTCGAAG AGTCGATCGC CAAGTCCAAT ATGAAGGCTG GCGAAGTGAT CTCTGCGGAA GTTGTGCGTA TCGACCACAA CTTCGTCGTT GTGAACGCGG GCCTGAAGTC TGAAGCTTTT GTTCCGGTCG AAGAGTTCCT GAACGATCAG GGCGAGCTGG AAGTGCAAGT CGGCGACTAC GTTTCGGTCG CAATCGACGC GCTGGAAAAC GGCTACGGCG ACACGATCCT GTCGCGCGAC AAGGCCAAGC GTCTGGCTTC GTGGCTGAAC CTTGAGAAGG CACTGGAATC CGGCGAGATC ATCTCCGGTA CGGTGACCGG CAAGGTCAAG GGCGGCCTGA CCGTCATGGT CAACGGTATT CGTGCATTCC TGCCGGGTTC GCTCGTCGAC GTGCGTCCGA TCAAGGACAC CACGCCGTAC GAAGGCAAGA CCCTCGAATT CAAGGTCATC AAGCTGGATC GCAAGCGCAA CAACGTTGTG CTGTCGCGCC GTGCCGTGGT CGAAGCCACG CTGGGCGAAG AGCGTCAGAA GCTGATGGAA ACGCTCAAGG AAGGTGCAAT CGTCAACGGT ATCGTCAAGA ACATCACCGA CTACGGCGCG TTCGTGGATC TGGGTGGCAT CGACGGTCTG CTGCACATCA CCGACCTGGC ATGGCGTCGT GTGCGTCACC CGAGCGAAGT GCTGTCGGTT GGCCAGGAAA TCACCGCCAA GATCCTCAAG TTCGACCAAG AGAAGAACCG CGTCTCGCTG GGCGTCAAGC AACTGGGCGA AGATCCGTGG GTCGGCATCT CGCGCCGCTA CCCGCAAGGC ACCCGCCTGT TCGGCAAGGT GACCAACCTG ACCGACTACG GCGCGTTCGT TGAGATCGAA GCCGGCATCG AAGGCTTGGT GCACGTGTCG GAAATGGACT GGACCAACAA GAACGTTGCT CCGTCCAAGG TTGTCCAGCT GGGCGACGAA GTGGAAGTCA TGGTCCTGGA CATCGATGAA GACAAGCGTC GTATCAGCCT GGGCATGAAG CAGTGCAAGG CCAACCCGTG GGACGATTTC GCTCGTAACC ACAAGAAGGG CGACAAGCTG GCCGGCCAGA TCAAGTCGAT CACCGACTTC GGCGTGTTCA TCGGCCTGCC GGGCGGCATC GACGGCCTGG TGCACCTGTC GGACCTGTCG TGGCAAGAGA CTGGCGAAGA AGCCGTTCGC AAGTACAAGA AGGGCGACGA AGTGGAAGCC GTGGTGCTGG CGATCGACGT CGACAAGGAA CGCATCTCGC TGGGTATCAA GCAACTGTCG GGCGACCCGT TCAACAACTT CGTGTCGACC AACGACAAGG GCTCGATCGT GCAGGTCACG ATCAAGACCG TTGATCCGAA GGGCGCCGTT GTGCAGCTGG CTGACGACGT GGAAGGCTAC CTGCGTGCCT CGGAAATCTC GAGCGACCGC GTGGAAGACG CCCGCAACGT GCTGAAGGAA GGCGAAACGA TGACCGCGAT GATCGTCAAC ATCGATCGCA AGTCGCGCAA CATCAACGTC TCCATCAAGG CGAAGGACAG CGCCGACCAA CAGGAAGCGA TGCAGAAGTT CTCGGCGGAT ACCGGCGCAG CTGGTACCAC GAACCTCGGC GCGCTGCTGA AGGCCAAGCT GAACGAAACC AACCAGTAA
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Protein sequence | MSQTNESFAA LFEESIAKSN MKAGEVISAE VVRIDHNFVV VNAGLKSEAF VPVEEFLNDQ GELEVQVGDY VSVAIDALEN GYGDTILSRD KAKRLASWLN LEKALESGEI ISGTVTGKVK GGLTVMVNGI RAFLPGSLVD VRPIKDTTPY EGKTLEFKVI KLDRKRNNVV LSRRAVVEAT LGEERQKLME TLKEGAIVNG IVKNITDYGA FVDLGGIDGL LHITDLAWRR VRHPSEVLSV GQEITAKILK FDQEKNRVSL GVKQLGEDPW VGISRRYPQG TRLFGKVTNL TDYGAFVEIE AGIEGLVHVS EMDWTNKNVA PSKVVQLGDE VEVMVLDIDE DKRRISLGMK QCKANPWDDF ARNHKKGDKL AGQIKSITDF GVFIGLPGGI DGLVHLSDLS WQETGEEAVR KYKKGDEVEA VVLAIDVDKE RISLGIKQLS GDPFNNFVST NDKGSIVQVT IKTVDPKGAV VQLADDVEGY LRASEISSDR VEDARNVLKE GETMTAMIVN IDRKSRNINV SIKAKDSADQ QEAMQKFSAD TGAAGTTNLG ALLKAKLNET NQ
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