Gene Rpic12D_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0839 
Symbol 
ID8018470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp878477 
End bp879193 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID644829618 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_002980812 
Protein GI241662452 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.761497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.099255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA CTCACGCGAA CGCCGATCCC GGCGAACTCG AAAAATTCAG TGAACTCGCC 
CACCGCTGGT GGGACCCGAA CAGCGAGTTC AAACCCTTGC ACGAAATCAA CCCGCTGCGG
CTTGACTGGA TTCAGTCCAT CACGCCGCTG GCAGGCAAAC GCATCGTCGA CGTGGGCTGC
GGCGGCGGCA TCCTCTCAGA GAGCATGGCG CGTGCCGGGG CCATCGTCAA AGGCATCGAT
CTCTCCCGCA AAGCATTGCG TGTTGCCGAC CTGCATAGCC TCGAGGCGGG CGTTACCGTC
GATTACGAGG AGATCGCCGC AGAAGCGTTG GCCGCACGCG AGCCGGGCAG CTTCGATGTC
GTCACTTGCA TGGAGATGCT CGAACATGTG CCTGATCCGG CGTCGGTTGT GCGCGCTTGC
GCGACGCTGG TCAAACCGGG TGGATACGTC TTTTTCTCCA CCATCCACCG GAATGCCAAG
GCGTATCTGC TGGCCGTCAT TGGCGCGGAA TATGTCCTCA ACATGCTGCC ACGCGGCACG
CATGATTACG CTAAGTTCAT CCGCCCGTCA GAGCTGAGCG CGTTCGTACG CGCGGCCGGC
CTTCAGGCGC AAGAGATGCG CGGGCTGGAA TACAACCCCA TCACCGCCCG CTACGCTCTT
ACGCAGGACA CGAGCGTCAA CTACCTGATG GCGACGCGCC GTCCGGTCGA GGCATGA
 
Protein sequence
MTTTHANADP GELEKFSELA HRWWDPNSEF KPLHEINPLR LDWIQSITPL AGKRIVDVGC 
GGGILSESMA RAGAIVKGID LSRKALRVAD LHSLEAGVTV DYEEIAAEAL AAREPGSFDV
VTCMEMLEHV PDPASVVRAC ATLVKPGGYV FFSTIHRNAK AYLLAVIGAE YVLNMLPRGT
HDYAKFIRPS ELSAFVRAAG LQAQEMRGLE YNPITARYAL TQDTSVNYLM ATRRPVEA