Gene Rpic12D_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0822 
Symbol 
ID8018452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp856255 
End bp857040 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID644829601 
Productaldolase II superfamily protein 
Protein accessionYP_002980795 
Protein GI241662435 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0953493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.275996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTG CCCTGCGCCC CGATGCCGTT GTGCCCGGCG GCGAGATCAG CCAGGCCGAG 
CGTGCGGTGC GCGTCGACCT GGCAGCCGCG TATCGACTGG CCGCGCTCAA CGGTTGGGAC
GATCTGGTCT ACACCCATCT TTCGGCCACC GTGCCGGGCG AGCCCGATCA CTTCCTGATC
AACGCCTTCG GCCTCGCGTT CGACGAAATC ACCGCATCCA ACCTCGTCAA GATCAATGGC
CGCGGCCAGC TAGTCGGCGA TTGGCCCGAG GGCGCTGCGC GTCCGTCCGT CAACGTCACG
GGCTTTGCAT TGCACGCGGC CGTGCATGCC GCACGGCCTG ACGCACAGTG TGTGATCCAT
CTGCATAACA CGGCGGGCAT TGCCGTGTCG GCGCAGAAGC ACGGGCTGCT GCCGCTTTCA
CAGCATGCCC TGCGTTTTCA CCGGCGTATT GCATATCACG ATTACGAAGG TTTGGCTTTT
ACGCCCGAAG AGGGCACGCG TCTTACCGCG TCGCTCGGCA ATCATTTCGC CATGCTGCTG
CGCAATCACG GCACGCTCAC CATCGGCCGC ACCGTGGCGG AGGCGCACGT TTTGATGGCC
ACGCTCATCA AGGCTTGCGA GATCCAGATC TTGGCGCAGG CCGGCGGCGA GGTCGTCTCG
CCCGCGCCGC ACGTGGCAGA TCGCGCGGCG GAACAGCTCG AAGATGGCGG CGCCATCGAA
GGCGTGATCG AGTGGCCGGC GCTGTTGCGC AAACTGGATA AAATCGACGC TTCGTATCGC
GACTGA
 
Protein sequence
MSFALRPDAV VPGGEISQAE RAVRVDLAAA YRLAALNGWD DLVYTHLSAT VPGEPDHFLI 
NAFGLAFDEI TASNLVKING RGQLVGDWPE GAARPSVNVT GFALHAAVHA ARPDAQCVIH
LHNTAGIAVS AQKHGLLPLS QHALRFHRRI AYHDYEGLAF TPEEGTRLTA SLGNHFAMLL
RNHGTLTIGR TVAEAHVLMA TLIKACEIQI LAQAGGEVVS PAPHVADRAA EQLEDGGAIE
GVIEWPALLR KLDKIDASYR D