Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0820 |
Symbol | |
ID | 8018450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 853954 |
End bp | 854862 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829599 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002980793 |
Protein GI | 241662433 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.378943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.194336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGT CCTCGCTCGA GATCTTCCGC GCTGTCGTGC GCGAAGGCGG CGTCACGCGG GCGGCGCAGC AGCTCAATCG CGTGCAGTCG AATGTGACGA CCCGCATCCG ACAGCTGGAG ACTTCGCTCG GCGTGCAACT CTTCGTACGT GAGAGCAAGC GCATGGTGCT CACGCCCGCC GGACAGACCC TGCTGACCTA CGCCGACGAC ATCCTCCGCC TGGCCGCCGA AGCGCGCCAG GCCGTGCAGC CGCGCGAGCC GCACGGGCGC CTGCGCATCG CCTCGATGGA AAGCACGGCG GCCAGCCGCC TTCCTGCTCT ACTGGCCACG CTGCATCAAC GCTGGCCGCG CGTGCAGCTC GAACTGGTGA CGATGACCAC GCGCCACTCA CTCCAGGCGC TATCGAACTT TGAAGTCGAT TGCGCGTTCG TTGCCGAAAC CGCGTGCTCG AACAACCGGC GCGCCGCCAT GACAACGCTG CCGGCTTTCT CGGAAGAACT GGTACTGATT GCCCACCGCG CCCATCCACC GATCCGCCGC GCGGCGGACG TGCAGACTGC CGGCATGCTC GCGTTCGAAC CTGGCTGCGC CTATCGGCAA TTGATCGAAG ACTGGTTCGC CGCAGACGGC GTGGTGCCGT CCCGCGTGCT GGAGCTTGGC TCCTACCACG CCATCATCGC GTGCGCGGCC GCCGGCATTG GTGTGGCGCT GGTGCCTCGC TCGGTGCTCG AGCTATATAC GAATGCGCCA GAAATCAGCA TCCACACGCT AGGCAAGCCG GGCCGTGTCG ACACGCTGCT CGCCTGGCAC CGCGACATGG CTGGCCCTGC CCTGCAGGCG CTCGTTCAGG TGCTGAGCGA GCCGCAGCCG GCGGCAAGCG CCACCCCACA CGAGGCGATT GCTGCCTAA
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Protein sequence | MDLSSLEIFR AVVREGGVTR AAQQLNRVQS NVTTRIRQLE TSLGVQLFVR ESKRMVLTPA GQTLLTYADD ILRLAAEARQ AVQPREPHGR LRIASMESTA ASRLPALLAT LHQRWPRVQL ELVTMTTRHS LQALSNFEVD CAFVAETACS NNRRAAMTTL PAFSEELVLI AHRAHPPIRR AADVQTAGML AFEPGCAYRQ LIEDWFAADG VVPSRVLELG SYHAIIACAA AGIGVALVPR SVLELYTNAP EISIHTLGKP GRVDTLLAWH RDMAGPALQA LVQVLSEPQP AASATPHEAI AA
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