Gene Rpic12D_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0792 
Symbol 
ID8018421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp822204 
End bp823106 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID644829570 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002980765 
Protein GI241662405 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0937857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.15291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG TAGCAATCAG CGCGCCAGCG CACCCGCCTA TCCTCGATGA CGAATACGCA 
CGCCGCTTTG GTGGGGTTGC CCGGTTGTAC GGCCCCCAAG CGCTTGAGCG TTTTGCGGCG
GCGCACGTTT GCGTGATCGG CATCGGCGGC GTGGGCTCGT GGGTGGCCGA GGCAGTGGCG
CGCTGCGGTG TCGGCAAATT CACGCTGATC GATCTCGATC ACATCGCGGT GTCCAACACC
AATCGTCAGA TCCACGCGCT GGGCGACGCG TATGGCATGG CCAAGGTTGA CGCCATGGCA
GAGCGCATTC TGCAGATCAA TCCGCGCGCC GAAATCAGCC GCATCGACGA TTTCGTGACT
GTCGAAAACG TCGAGGCATT GCTCGGCCAC CCGTTCGACT ACGTGATCGA CGCCATTGAC
GCTGTGAAGG TGAAGACGGC GATCATCGCG TTCTGCAAAC GCACCGGCAA ACGTGTCGTG
ACGTGCGGCG CCGCGGGTGG GCAATTGGAC CCCACGCGCA TTCGCGTGAC GGATCTCTCG
CGCACGATTC AAGACCCGCT GCTGGCCAAG GTGCGCGGCA ACCTGCGTCG CCAGCACGGC
TTTTCGAAAA ACCCGAAGTC GCGTTTCGGT ATCGACGCGG TGTTCTCCGA CGAGCCGCTG
CGCTACCCCG AACCCGAGCA GCAGGCGTGC GCTGTGGAGT TGCCGGTCGA GTCCAGCCAC
GCCGGCATCG ACGACCTTGC AGCGGCGGGC CACATTGCCG TGGTCAACGC GCCGCCCGCG
CCACAGCCTG CGCAGGGGCC GCAGGGCCTG GCATGCGCGG GGTTTGGTTC GTCCGTATGT
GTGACGGCGG TGTTCGGGAT GGTGGCCGCG TCAACGGCGC TGCGGGCGAT CGCCGGCGTC
TGA
 
Protein sequence
MSQVAISAPA HPPILDDEYA RRFGGVARLY GPQALERFAA AHVCVIGIGG VGSWVAEAVA 
RCGVGKFTLI DLDHIAVSNT NRQIHALGDA YGMAKVDAMA ERILQINPRA EISRIDDFVT
VENVEALLGH PFDYVIDAID AVKVKTAIIA FCKRTGKRVV TCGAAGGQLD PTRIRVTDLS
RTIQDPLLAK VRGNLRRQHG FSKNPKSRFG IDAVFSDEPL RYPEPEQQAC AVELPVESSH
AGIDDLAAAG HIAVVNAPPA PQPAQGPQGL ACAGFGSSVC VTAVFGMVAA STALRAIAGV